Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0208
(596 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0456 + 29521282-29522064 32 0.40
03_01_0196 + 1559190-1560395 31 0.53
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 31 0.70
03_04_0006 + 16257288-16259522 30 1.6
02_01_0490 + 3541056-3542276 30 1.6
06_03_0854 + 25400855-25403741,25406174-25407708 29 2.8
06_03_1448 + 30235336-30236763 29 3.7
06_03_1443 + 30182018-30183445 29 3.7
06_03_1440 + 30166515-30167942 29 3.7
06_03_1437 + 30151030-30152457 29 3.7
06_03_1429 + 30100834-30102261 29 3.7
06_03_1425 + 30084383-30085810 29 3.7
06_03_1420 - 30053713-30055140 29 3.7
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 29 3.7
02_05_1030 + 33623372-33623975,33624098-33624105 29 3.7
02_02_0406 - 9888167-9888570,9890168-9890248,9892207-9892600 29 3.7
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 29 3.7
08_01_0799 + 7734031-7735102,7735453-7735475 28 4.9
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 28 4.9
02_05_0726 - 31252210-31253166,31253667-31253840,31254320-312543... 28 4.9
02_01_0697 + 5209325-5209557,5209690-5209749,5209894-5210038,521... 28 4.9
12_02_0077 - 13288916-13289659,13289689-13289691 28 6.5
12_01_0843 + 7891622-7892524 28 6.5
08_02_1371 + 26493981-26494471,26497374-26497504,26497947-26498692 28 6.5
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 28 6.5
04_01_0416 - 5504415-5504590,5509032-5509116,5509190-5509322,550... 28 6.5
01_06_1520 - 37950262-37950271,37950639-37950749,37950965-379511... 28 6.5
06_03_0507 + 21603472-21603750,21604371-21604463,21605046-216053... 27 8.6
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 27 8.6
01_06_1759 + 39689410-39689573,39689728-39689923,39690014-396901... 27 8.6
01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,644... 27 8.6
>01_06_0456 + 29521282-29522064
Length = 260
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = -1
Query: 428 AWQC--PRTGSRGSFKRRRAFPPRHHSARLER----NTVRPPILSTA 306
AW+C P +G+RG +RRR P S R R +T+RP + S A
Sbjct: 12 AWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLRPYVTSAA 58
>03_01_0196 + 1559190-1560395
Length = 401
Score = 31.5 bits (68), Expect = 0.53
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 339 KHRAPADIIDRAPLPPNRVSNETMKVVVFSD-DRAKRSPTYATPLMSPYNARLESSSTGS 163
K R A +ID P+ V N M V +F D A SP A P SP + +S +
Sbjct: 303 KSRVAATVIDDTPVCVLTVDNLLMPVELFGDAPAAAPSPDDAAPAPSP---SVADASPPA 359
Query: 162 SFPADSP-KP 136
PAD+P KP
Sbjct: 360 PPPADAPSKP 369
>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
8905437-8905690,8905785-8908799,8908889-8909001,
8909975-8910164,8910399-8910512,8910591-8910698,
8910941-8911073,8911206-8911408,8911626-8911826
Length = 1889
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 33 GSQMPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSL 179
G+ PR + D EW N PT+ ++ + +PRE Q+ K + L
Sbjct: 1393 GNCAPRTVECDEGEWYNNFPTIDENHVQRNKPREEQIFQQKLKPAIFIL 1441
>03_04_0006 + 16257288-16259522
Length = 744
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -3
Query: 240 AKRSP---TYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWE 88
A+RSP Y T L + ARL T PA SP +AV S + G W+
Sbjct: 162 ARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWD 215
>02_01_0490 + 3541056-3542276
Length = 406
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 379 RRRLKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKPP 510
R RL+L R + H A + A ++K A + PA+R PP
Sbjct: 244 RPRLRLVRSQPQPHPPAAAAAAAAAVAKPRAAIQSPARRRPSPP 287
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 240 AKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 115
AKR+PT T P AR +++ +F +P P P +V+S
Sbjct: 475 AKRAPTAVTVGAPPPQARTPAAAPAKAF-VSAPAPAPSSVIS 515
>06_03_1448 + 30235336-30236763
Length = 475
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 433 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 296
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1443 + 30182018-30183445
Length = 475
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 433 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 296
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1440 + 30166515-30167942
Length = 475
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 433 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 296
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1437 + 30151030-30152457
Length = 475
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 433 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 296
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1429 + 30100834-30102261
Length = 475
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 433 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 296
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1425 + 30084383-30085810
Length = 475
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 433 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 296
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1420 - 30053713-30055140
Length = 475
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 433 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 296
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 361 TTLHAWNETPCARRYY 314
TT AW ETPCA R++
Sbjct: 560 TTTEAWVETPCAHRFH 575
>02_05_1030 + 33623372-33623975,33624098-33624105
Length = 203
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Frame = +1
Query: 367 GGNARRRLKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQ------RGQKPPWSKRAK 528
GG+ R + L R+ + G + G +G + + + + R A RG P WS+
Sbjct: 19 GGSGRFKRALLRNLILGLRKGGVASGEMGFHERKSAIKRAADAALAAARGAAPCWSRSLA 78
Query: 529 AGLIQMFSTHR 561
A L Q HR
Sbjct: 79 AELAQAPQQHR 89
>02_02_0406 - 9888167-9888570,9890168-9890248,9892207-9892600
Length = 292
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 385 RLKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKPPWSKRAKAGLIQMFSTHRD 564
RL+ P G C A ++ A +S G++ PA+ ++P +R + ++ R+
Sbjct: 30 RLRRPLAAAAGACVAAAVAAAAGVS---LGIVFPAEPAERPFCRERRMLEALPAAASSRE 86
Query: 565 CETTAYR 585
E AYR
Sbjct: 87 EEPEAYR 93
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 369 RKRSSPFKTPA*SGSRTLPGGEFDWGGTSV 458
+KR P K PA S S+ LPG + + G SV
Sbjct: 339 KKRGRPRKYPAPSNSKHLPGTDTELGNDSV 368
>08_01_0799 + 7734031-7735102,7735453-7735475
Length = 364
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 375 VSATSPLCTLGTKHRAPADI--IDRAPLPPNRVSNETMKVVVFSDDRAKRSPTYATPLMS 202
+S L T RA D+ + A P V +ET + SDD +K +P YAT M+
Sbjct: 70 ISVYLELLTKNCAVRAAYDLRLVKHATGLPMSVYSETTHRMFNSDDSSKFAPPYAT-FMN 128
Query: 201 PYNARLESS 175
N +E+S
Sbjct: 129 RSNLEMEAS 137
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 448 PPQSNSPPGSVLEPDHAGVLNGDE 377
P +NS P +V +PD +LNGDE
Sbjct: 739 PTSNNSVPQNVDQPDSKKMLNGDE 762
>02_05_0726 -
31252210-31253166,31253667-31253840,31254320-31254364,
31254463-31254573,31254669-31254746,31255170-31255234,
31255358-31255733,31256891-31257035,31257308-31257462,
31259036-31259182
Length = 750
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Frame = -3
Query: 432 PRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADI--IDRAPLP------PNRVSN 277
P LA+ + I ++F ++ TS G H + AP P P+ +++
Sbjct: 84 PLLALPNTAIIKDFVGFCHIATTSSSPKTGQGHEPTTCFRPVLLAPSPLCLTRGPHTITH 143
Query: 276 ETMKVVVFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 130
+ + + SP Y P ++ N + S +T S P PK P
Sbjct: 144 QIEAPQADHVEDSVSSPKYVKPAVAKQNGEVVSRATKSDAPVSKPKVDP 192
>02_01_0697 +
5209325-5209557,5209690-5209749,5209894-5210038,
5210149-5210306,5210990-5211071,5211154-5211220,
5211302-5211347,5211441-5211606,5211729-5211814,
5211916-5211996,5212084-5212144
Length = 394
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 342 TKHRAPADIIDRAPLPPNRVSNETMKVVVFSDDRAKRSPTYATP 211
T H+ P + RA + P RVS+ + VF DD P P
Sbjct: 316 TSHKIPQKVGSRAAVQPTRVSS----IEVFVDDECAEEPVPQVP 355
>12_02_0077 - 13288916-13289659,13289689-13289691
Length = 248
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 183 ESSSTGSSFPADSPKPVPLAVVSLDSR 103
++ S G S P DS + VP+ VV+L R
Sbjct: 3 DNQSLGKSLPKDSRRHVPVGVVALKKR 29
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -3
Query: 306 APLPPNRVSNETMKVVVFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 127
AP P V+ +T+ VV +R L SP SSS+G + SP P P
Sbjct: 66 APAPAPSVAGKTVPKVVGDCKEMEREKEKEKSLSSP-----SSSSSGMTSVESSPPPPPS 120
Query: 126 AVVSL 112
A++ L
Sbjct: 121 AMLPL 125
>08_02_1371 + 26493981-26494471,26497374-26497504,26497947-26498692
Length = 455
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 292 GRKRCAVD-NIGGRTVFRSKRAEW*RGGNARRRLKLPRDPVRGHCQAGSLTGAVHLSKNN 468
GR+ C+VD +GG F GG A+ R+ + +P +G A + TGA + ++
Sbjct: 48 GRQECSVDLKLGGLGEFG--------GGGAQPRVAVAGEPAKGKGPAAAATGAA-AAASS 98
Query: 469 AGVLRP 486
A RP
Sbjct: 99 APAKRP 104
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 325 GRTVFRSKR--AEW*RGGNARRRLKLPRDPVRGHCQAGSLTGA 447
G+T+ R R A W RG A RR +LP G +AG G+
Sbjct: 36 GQTLTRGPRTCAVWRRGRAAVRRRRLPAASAEGGAKAGRSLGS 78
>04_01_0416 -
5504415-5504590,5509032-5509116,5509190-5509322,
5509426-5510312
Length = 426
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -3
Query: 213 PLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDS 106
PL+ P AR SSTGSSFP S P ++ L S
Sbjct: 47 PLIHPTPARF-ISSTGSSFPPYSEPPPSAPMLELGS 81
>01_06_1520 -
37950262-37950271,37950639-37950749,37950965-37951187,
37951291-37951525,37951641-37951772,37951865-37952230
Length = 358
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -3
Query: 300 LPPNRVSNETMKVVVFSDDRAK----RSPTYATPLMSPYNARLESSSTGSSFPADSPKPV 133
+PP VS + VV S A R P ++PY A + SSS+ S+F P P
Sbjct: 1 MPPPAVSTAPVAPVVASSSSAAAAAPRRPRSLRLRVTPY-ASVSSSSSPSTFAVSIPPPP 59
Query: 132 P 130
P
Sbjct: 60 P 60
>06_03_0507 +
21603472-21603750,21604371-21604463,21605046-21605372,
21605588-21605863,21606095-21607114
Length = 664
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1
Query: 443 PVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPP 321
P++LPA + P T + +R +AF +S R ++T RPP
Sbjct: 398 PLQLPAGEPPVTPAWNDTQRSKAFT---YSIRARKDTNRPP 435
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -3
Query: 297 PPNRVSNETMKVVVFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 136
PP S +T + F K PT A+P+ P N R S P S P
Sbjct: 487 PPPWASEDTAESNPFIAASLKNQPTSASPVNVPLNLRPLQQSNSFGVPLRSAGP 540
>01_06_1759 +
39689410-39689573,39689728-39689923,39690014-39690103,
39690221-39690277,39690391-39690460,39690747-39690811,
39691408-39691462,39691704-39691831,39691919-39691950,
39692205-39692274,39692723-39692824,39692921-39693010,
39693084-39693232,39693620-39693731,39695332-39695412,
39695481-39695705,39695815-39695937,39696021-39696137
Length = 641
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 484 ALGHLRYSLTDVPPQSNSPPGSVLEP 407
ALGH+ L + P ++ PP ++P
Sbjct: 494 ALGHIELDLPEAPEKAPKPPAQAVDP 519
>01_01_0827 +
6443319-6446085,6446317-6446407,6446502-6448017,
6448164-6448243,6449045-6449129,6449221-6449312,
6449388-6449456,6449544-6449580,6449662-6449744,
6450427-6450873,6450978-6451014,6451101-6451158,
6451243-6451382,6451610-6451675,6451794-6451908,
6453261-6453299,6453482-6453543
Length = 1927
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -3
Query: 327 PADIIDRAPLPPNRVSNETMKVVVFSDDRAKRSPTYATPLMS 202
P + ID P + + + V DD+ ++P ATP+ S
Sbjct: 80 PTECIDLNKTPARKPKKKKHRPKVLKDDKPSKTPKSATPIPS 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,966,736
Number of Sequences: 37544
Number of extensions: 417486
Number of successful extensions: 1483
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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