Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0208
         (596 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous po...    30   2.1  
AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA...    30   2.1  
AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA...    30   2.1  
AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p pro...    29   4.8  
AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro...    29   6.3  
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA...    29   6.3  
AF132156-1|AAD34744.1|  145|Drosophila melanogaster unknown prot...    28   8.4  
AE014298-2529|AAN09434.1| 1370|Drosophila melanogaster CG32562-P...    28   8.4  
AE014296-2756|AAN11755.1|  145|Drosophila melanogaster CG4143-PB...    28   8.4  
AE014296-2755|AAF49449.1|  145|Drosophila melanogaster CG4143-PA...    28   8.4  
AB031273-1|BAA83523.1|  145|Drosophila melanogaster Multiprotein...    28   8.4  

>U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous
            polyposis coli protein.
          Length = 2416

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = -3

Query: 330  APADIIDRAPLPPNRVSNETMKVVVFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPA 151
            APA +  +     +  +N  ++V V     A+ SPT+     S    +  ++S GS   A
Sbjct: 2220 APARLERQGTFVKDEPTNSNVQVPVVETKPAQTSPTHRA---SKLPTKKGTASGGSPSKA 2276

Query: 150  DSPKPVPLA 124
             SPK +PLA
Sbjct: 2277 GSPKRIPLA 2285


>AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA
            protein.
          Length = 2417

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = -3

Query: 330  APADIIDRAPLPPNRVSNETMKVVVFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPA 151
            APA +  +     +  +N  ++V V     A+ SPT+     S    +  ++S GS   A
Sbjct: 2221 APARLERQGTFVKDEPTNSNVQVPVVETKPAQTSPTHRA---SKLPTKKGTASGGSPSKA 2277

Query: 150  DSPKPVPLA 124
             SPK +PLA
Sbjct: 2278 GSPKRIPLA 2286


>AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA
           protein.
          Length = 950

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
 Frame = -3

Query: 441 SQTPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNE--TM 268
           S +P  A S  R+      A +V A S +  +G +   P +     P  P R S++    
Sbjct: 83  SSSPGEAASVMRVQLFGVIAVAVVAVSLVRDVGAE--PPVNNAYLPPSSPQRPSSKYGAP 140

Query: 267 KVVVFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 136
            V  +    +  +P++ +   S Y A  +S+S+G  +PA +P+P
Sbjct: 141 PVSSYLPPASGPAPSFNSAPSSSYAAPSQSASSGGPYPAAAPRP 184


>AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p
           protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -2

Query: 244 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 122
           S+ TI   CY  ++S    QCQ R+   +VFF    S A    C
Sbjct: 14  SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57


>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p protein.
          Length = 2486

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -3

Query: 303  PLPPNRVSNETMKVV--VFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 130
            P PP  +SN T   +  V +   A+ S    +PL  P  A +  S+T  SF + S  P P
Sbjct: 1629 PTPP--LSNCTSMGIGMVNAASTARSSCNAISPLSIPATAGIHVSATNPSFQSSSYFPTP 1686

Query: 129  LA 124
            LA
Sbjct: 1687 LA 1688


>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
            protein.
          Length = 2486

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -3

Query: 303  PLPPNRVSNETMKVV--VFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 130
            P PP  +SN T   +  V +   A+ S    +PL  P  A +  S+T  SF + S  P P
Sbjct: 1629 PTPP--LSNCTSMGIGMVNAASTARSSCNAISPLSIPATAGIHVSATNPSFQSSSYFPTP 1686

Query: 129  LA 124
            LA
Sbjct: 1687 LA 1688


>AF132156-1|AAD34744.1|  145|Drosophila melanogaster unknown
           protein.
          Length = 145

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 438 DWGGTSVKE*RRCPKASSARTETSVEQKGKSWLDPDVQYA*GLRNN 575
           DW   +V   ++ PK+S+ +TE++V Q  +  +  D Q   G   N
Sbjct: 3   DWDSVTVLR-KKAPKSSTLKTESAVNQARRQGVAVDTQQKYGAGTN 47


>AE014298-2529|AAN09434.1| 1370|Drosophila melanogaster CG32562-PA
           protein.
          Length = 1370

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 486 SSARTETSVEQKGKSWLDPDVQ 551
           S A  ET+  QK + W+DPD+Q
Sbjct: 79  SYADNETAPAQKTEEWVDPDIQ 100


>AE014296-2756|AAN11755.1|  145|Drosophila melanogaster CG4143-PB,
           isoform B protein.
          Length = 145

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 438 DWGGTSVKE*RRCPKASSARTETSVEQKGKSWLDPDVQYA*GLRNN 575
           DW   +V   ++ PK+S+ +TE++V Q  +  +  D Q   G   N
Sbjct: 3   DWDSVTVLR-KKAPKSSTLKTESAVNQARRQGVAVDTQQKYGAGTN 47


>AE014296-2755|AAF49449.1|  145|Drosophila melanogaster CG4143-PA,
           isoform A protein.
          Length = 145

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 438 DWGGTSVKE*RRCPKASSARTETSVEQKGKSWLDPDVQYA*GLRNN 575
           DW   +V   ++ PK+S+ +TE++V Q  +  +  D Q   G   N
Sbjct: 3   DWDSVTVLR-KKAPKSSTLKTESAVNQARRQGVAVDTQQKYGAGTN 47


>AB031273-1|BAA83523.1|  145|Drosophila melanogaster Multiprotein
           Bridging Factor 1 protein.
          Length = 145

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 438 DWGGTSVKE*RRCPKASSARTETSVEQKGKSWLDPDVQYA*GLRNN 575
           DW   +V   ++ PK+S+ +TE++V Q  +  +  D Q   G   N
Sbjct: 3   DWDSVTVLR-KKAPKSSTLKTESAVNQARRQGVAVDTQQKYGAGTN 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,851,000
Number of Sequences: 53049
Number of extensions: 649207
Number of successful extensions: 2588
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2588
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)