Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0206
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.3  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   5.4  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +3

Query: 33  LSSYVRD----FRTPEASRFQSVNEGAL*AQMLGPERW*TM-PGQVEVRGNPD 176
           + SY +D    + T E    +SV  G     +LGP  W TM  G +++   PD
Sbjct: 600 IHSYFQDRELVYETSEGPVVRSVTAGVPQGSILGPTLWNTMYDGVLDIALPPD 652


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 463 LPKLAHLAPSSDLRLHGWSNPE 398
           LPK+A   PS  + + GW  P+
Sbjct: 523 LPKIATDLPSETMDVRGWKLPK 544


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,576
Number of Sequences: 2352
Number of extensions: 14156
Number of successful extensions: 61
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)