Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0204
         (412 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    30   3.4  
BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open read...    29   6.0  
BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.     29   6.0  
BC030612-1|AAH30612.1|  777|Homo sapiens G elongation factor, mi...    29   7.9  
BC015712-1|AAH15712.1|  779|Homo sapiens GFM2 protein protein.         29   7.9  
AY453587-1|AAS49035.1|  531|Homo sapiens elongation factor G iso...    29   7.9  
AK025314-1|BAB15109.1|  513|Homo sapiens protein ( Homo sapiens ...    29   7.9  
AF367997-1|AAK53401.1|  779|Homo sapiens elongation factor G2 pr...    29   7.9  
AF111808-1|AAL39010.1|  732|Homo sapiens MSTP027 protein.              29   7.9  

>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 7    PSLDVVAVSQAPSPESNPDSPLPVTTMVVA 96
            PS+   +   + SPES P SPLPVT ++ +
Sbjct: 5639 PSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668


>BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open reading
           frame 28 protein.
          Length = 480

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 311 WITVVILELIHAIRTLTSDG*VLLLDQNQSTEGLASEVVNFD 186
           W T ++L L H++R  +S G  LLL   Q  +GL + +V ++
Sbjct: 39  WFTYLLLYL-HSVRAYSSRGAGLLLLLGQVADGLCTPLVGYE 79


>BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 311 WITVVILELIHAIRTLTSDG*VLLLDQNQSTEGLASEVVNFD 186
           W T ++L L H++R  +S G  LLL   Q  +GL + +V ++
Sbjct: 39  WFTYLLLYL-HSVRAYSSRGAGLLLLLGQVADGLCTPLVGYE 79


>BC030612-1|AAH30612.1|  777|Homo sapiens G elongation factor,
           mitochondrial 2 protein.
          Length = 777

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 193 ILMNLDNFCRSHGQVPATHLSNVCLINFRW*FLRLPWLSRVTGNQGSIP 47
           +L NL  F  SH  +P+ +++N+C    R    RL     +  N  S+P
Sbjct: 1   MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLP 49


>BC015712-1|AAH15712.1|  779|Homo sapiens GFM2 protein protein.
          Length = 779

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 193 ILMNLDNFCRSHGQVPATHLSNVCLINFRW*FLRLPWLSRVTGNQGSIP 47
           +L NL  F  SH  +P+ +++N+C    R    RL     +  N  S+P
Sbjct: 1   MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLP 49


>AY453587-1|AAS49035.1|  531|Homo sapiens elongation factor G
           isoform protein.
          Length = 531

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 193 ILMNLDNFCRSHGQVPATHLSNVCLINFRW*FLRLPWLSRVTGNQGSIP 47
           +L NL  F  SH  +P+ +++N+C    R    RL     +  N  S+P
Sbjct: 1   MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLP 49


>AK025314-1|BAB15109.1|  513|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21661 fis, clone COL08837. ).
          Length = 513

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 193 ILMNLDNFCRSHGQVPATHLSNVCLINFRW*FLRLPWLSRVTGNQGSIP 47
           +L NL  F  SH  +P+ +++N+C    R    RL     +  N  S+P
Sbjct: 1   MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLP 49


>AF367997-1|AAK53401.1|  779|Homo sapiens elongation factor G2
           protein.
          Length = 779

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 193 ILMNLDNFCRSHGQVPATHLSNVCLINFRW*FLRLPWLSRVTGNQGSIP 47
           +L NL  F  SH  +P+ +++N+C    R    RL     +  N  S+P
Sbjct: 1   MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLP 49


>AF111808-1|AAL39010.1|  732|Homo sapiens MSTP027 protein.
          Length = 732

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 193 ILMNLDNFCRSHGQVPATHLSNVCLINFRW*FLRLPWLSRVTGNQGSIP 47
           +L NL  F  SH  +P+ +++N+C    R    RL     +  N  S+P
Sbjct: 1   MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLP 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,770,810
Number of Sequences: 237096
Number of extensions: 1153937
Number of successful extensions: 3075
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3075
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)