Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0199
         (436 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E80A81 Cluster: PREDICTED: hypothetical protein;...    36   0.49 
UniRef50_Q09AC4 Cluster: Putative uncharacterized protein; n=1; ...    34   1.1  
UniRef50_UPI0000EBD4BB Cluster: PREDICTED: hypothetical protein;...    33   2.0  
UniRef50_UPI0000F2AF6C Cluster: PREDICTED: hypothetical protein;...    33   3.5  
UniRef50_UPI00006C08D5 Cluster: PREDICTED: hypothetical protein;...    33   3.5  
UniRef50_Q9P952 Cluster: Transcription factor ScGATA-6; n=1; Sch...    33   3.5  
UniRef50_Q8TGM6 Cluster: Protein TAR1; n=1; Saccharomyces cerevi...    33   3.5  
UniRef50_A5Z4A0 Cluster: Putative uncharacterized protein; n=1; ...    32   4.6  
UniRef50_Q8N9P0 Cluster: CDNA FLJ36797 fis, clone ADRGL2006846; ...    32   4.6  
UniRef50_A5XLE6 Cluster: Putative uncharacterized protein; n=1; ...    32   6.0  
UniRef50_Q5ZE63 Cluster: Putative uncharacterized protein P0501G...    31   8.0  

>UniRef50_UPI0000E80A81 Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 400

 Score = 35.5 bits (78), Expect = 0.49
 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -2

Query: 234 SFRRHPSAAR-GLPPSTGKRPRSRRTWPGVVATRKR 130
           S +RH SA+R   PPS G RPR+ RT P V A R++
Sbjct: 127 SEKRHASASRPSSPPSEGDRPRAPRTAPHVRALRRQ 162


>UniRef50_Q09AC4 Cluster: Putative uncharacterized protein; n=1;
           Stigmatella aurantiaca DW4/3-1|Rep: Putative
           uncharacterized protein - Stigmatella aurantiaca DW4/3-1
          Length = 733

 Score = 34.3 bits (75), Expect = 1.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 219 PSAARGLPPSTGKRPRSRRTWPGVVATRKRNLPNTTSP 106
           P++   LPP T  RP SRR    + +  K+  P+ T+P
Sbjct: 47  PASCCSLPPPTATRPSSRRRITSISSVNKKAFPSATAP 84


>UniRef50_UPI0000EBD4BB Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 304

 Score = 33.5 bits (73), Expect = 2.0
 Identities = 16/27 (59%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -2

Query: 225 RHPSAARGLPPSTGKRPRSRRT-WPGV 148
           R PSA  GLPP     PR RR  WPGV
Sbjct: 94  RGPSAPAGLPPPLSPAPRLRRVGWPGV 120


>UniRef50_UPI0000F2AF6C Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 337

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -2

Query: 276 PFRAAF*TPRF*GASFRRHPSAARGLPPSTGKRPRSRRTWPGVVATRKRNLPNTTSP 106
           P R +   PR  G +    P+  RG P    + PR+RR   G      RN P++ SP
Sbjct: 130 PARCSPARPRLLGIASHWVPNKDRGRPAGRLQNPRARRLAAGAAGRGLRNSPSSCSP 186


>UniRef50_UPI00006C08D5 Cluster: PREDICTED: hypothetical protein;
           n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 243

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 20/57 (35%), Positives = 24/57 (42%)
 Frame = -2

Query: 276 PFRAAF*TPRF*GASFRRHPSAARGLPPSTGKRPRSRRTWPGVVATRKRNLPNTTSP 106
           P R     PR    S    P  ARG PPST +RP        + A  +R  P+  SP
Sbjct: 48  PLRPLTAAPRQEDPSVHSPPPLARGTPPSTHRRPSPGGPLRPLTAAPRREDPSVHSP 104


>UniRef50_Q9P952 Cluster: Transcription factor ScGATA-6; n=1;
            Schizophyllum commune|Rep: Transcription factor ScGATA-6
            - Schizophyllum commune (Bracket fungus)
          Length = 1075

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 237  ASFRRHPSAARGLPPSTGKRPRSRRTWP-GVVATRKRNLPNTTSP 106
            AS    P +  GLPP+TG++   R+  P    A RK++LP   SP
Sbjct: 872  ASTASTPPSGDGLPPTTGRQAAQRKYVPLKQNAQRKKSLPTLQSP 916


>UniRef50_Q8TGM6 Cluster: Protein TAR1; n=1; Saccharomyces
           cerevisiae|Rep: Protein TAR1 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 124

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = -2

Query: 303 HLPLDGVYHPFRAAF*TPRF*GASFRRHPSAARGLPPSTGKRP 175
           +L LDG+YHP RAAF  P    ++ RRH +  R  P  TG  P
Sbjct: 54  YLALDGIYHPLRAAF--PN--NSTLRRHFTKNR-TPRHTGFSP 91


>UniRef50_A5Z4A0 Cluster: Putative uncharacterized protein; n=1;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 72

 Score = 32.3 bits (70), Expect = 4.6
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -1

Query: 82  SVLGYIPVRSPLLRKSWLVSFPPLT 8
           S  G +P RSPLL KS  +SFPP T
Sbjct: 48  SRFGLLPFRSPLLWKSIFLSFPPAT 72


>UniRef50_Q8N9P0 Cluster: CDNA FLJ36797 fis, clone ADRGL2006846;
           n=2; Homo/Pan/Gorilla group|Rep: CDNA FLJ36797 fis,
           clone ADRGL2006846 - Homo sapiens (Human)
          Length = 234

 Score = 32.3 bits (70), Expect = 4.6
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -2

Query: 228 RRHPSAARGLPPSTGKRPRSRRTWPGVVATRKRNLPNTTSP 106
           RR  + ARG PP+ G+ P  RR+  G   T KR  P   SP
Sbjct: 176 RRDVAGARGAPPAWGQAPSPRRSVGGPQKTLKR--PKACSP 214


>UniRef50_A5XLE6 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia mallei JHU|Rep: Putative uncharacterized
           protein - Burkholderia mallei JHU
          Length = 131

 Score = 31.9 bits (69), Expect = 6.0
 Identities = 17/38 (44%), Positives = 18/38 (47%)
 Frame = -2

Query: 225 RHPSAARGLPPSTGKRPRSRRTWPGVVATRKRNLPNTT 112
           R P  ARG  PS   R RSR   PG  A+     P TT
Sbjct: 58  RTPGTARGSAPSCSSRRRSRVASPGSTASSPSPSPRTT 95


>UniRef50_Q5ZE63 Cluster: Putative uncharacterized protein
           P0501G01.27; n=3; Oryza sativa|Rep: Putative
           uncharacterized protein P0501G01.27 - Oryza sativa
           subsp. japonica (Rice)
          Length = 327

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -2

Query: 228 RRHPSAARGLPPSTGKRPRSRRTWPGVVATRKRNLPNTTSPV 103
           R  P   R   P T +  RS+  WP    T  R LP+T++PV
Sbjct: 82  RTPPPTTRPTAPRTRRLGRSQGGWPTRARTAWRPLPSTSAPV 123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,212,193
Number of Sequences: 1657284
Number of extensions: 10160403
Number of successful extensions: 24376
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24369
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)