Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0199
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   2.9  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   3.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   3.8  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    20   8.9  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    20   8.9  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   8.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   8.9  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 225 RHPSAARGLPPSTGKRPRS 169
           + P A +G P +  KRPR+
Sbjct: 215 KKPGAKQGAPTAEEKRPRT 233



 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 195 PSTGKRPRSRR 163
           PS+G+ PR+RR
Sbjct: 203 PSSGRSPRTRR 213


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 350 VKCYSPHISPHNISG 394
           + C   H+SPH I G
Sbjct: 34  IGCDEKHVSPHVIGG 48


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 417 PKVYNLMLPLILCGEM 370
           P +  ++LPL+ CG M
Sbjct: 185 PVILTVVLPLLACGVM 200


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 238 SLKSGCLECSPKR 276
           +LKS C +CS K+
Sbjct: 65  ALKSDCAKCSEKQ 77


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 211 RGRVPPKGRSLKS 249
           +GR  P+G+ LKS
Sbjct: 48  KGRCTPEGKKLKS 60


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 40  SLVAASEQEYSPALNPVVLIDNG 108
           S+   S   YSP  NP  L D G
Sbjct: 24  SIGVESSAFYSPLSNPYALKDAG 46


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 107 PLSIKTTGFSAGLYS 63
           P+S++ TGFS   YS
Sbjct: 20  PVSVEPTGFSPKGYS 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,269
Number of Sequences: 336
Number of extensions: 2214
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)