Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0199
         (436 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   1.2  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      25   1.5  
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        23   3.6  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   3.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   3.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   4.7  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    22   8.2  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 204 GLPPSTGKRPRSRRTWPGVVATRKRNLPNTTSPVID 97
           G  P      ++ R W GV+   KR  P   S ++D
Sbjct: 406 GKKPPNNPLEKTNRLWGGVINDIKRRYPMYKSDIMD 441


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 213 AARGLPPSTGKRPRSRRTWPGVVATRK 133
           AAR   PSTG   +  R  PG VA R+
Sbjct: 25  AARKSAPSTGGVKKPHRYRPGTVALRE 51


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 213 AARGLPPSTGKRPRSRRTWPGVVATRK 133
           AAR   P+TG   +  R  PG VA R+
Sbjct: 23  AARKSAPATGGVKKPHRYRPGTVALRE 49


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 140 VATTPGQVRLERGRFPVEGGKPLAAEGC 223
           +   P QV  ER R   EGG    + GC
Sbjct: 333 IINRPPQVPGERDRIANEGGTGCGSHGC 360


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 140 VATTPGQVRLERGRFPVEGGKPLAAEGC 223
           +   P QV  ER R   EGG    + GC
Sbjct: 333 IINRPPQVPGERDRIANEGGTGCGSHGC 360


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 16  EEKKLTRISLVAASEQ 63
           EE+K TR++L AA EQ
Sbjct: 873 EERKRTRVALSAALEQ 888


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 395 SRLYCVEKCEANNISXQEPVMPMITNWSSVPI 300
           S  YCV +   N ++ +   + ++ N + +PI
Sbjct: 34  SEPYCVPRNNGNWVTDESKTVAIVVNGNRLPI 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,721
Number of Sequences: 2352
Number of extensions: 10085
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)