Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0193
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    26   0.84 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   3.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   5.9  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   7.8  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   7.8  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   7.8  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   7.8  

>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 26.2 bits (55), Expect = 0.84
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +2

Query: 116 YHQDLHRRRLQAGSRPDPSALSVAH-VLLVTA**YQIKNLASHVPVTECIGKTLQRH 283
           YH D H     A  RP+PSA+ +A  V  V A    + + A H PV      T+Q H
Sbjct: 128 YHAD-HHTGFNAVVRPEPSAVKIAQPVHKVIAQPVHVSSYA-HAPVAHA---TVQHH 179


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +2

Query: 65  ETLLHVSPPGPRWSICYYHQDLHRRRLQAGSRPDPSALSVAHVLLVTA 208
           +++ ++S P   WSI Y+ +D+    +QA    + +       +LVTA
Sbjct: 210 QSVRNLSRPITGWSIKYFSKDIFEVMMQAAVDTEVTTSEDLMRILVTA 257


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 64  RNPSPRQSSRASLEYLLLPPRSAPTEAPSG 153
           RN   ++  RAS    ++PPRS    A  G
Sbjct: 225 RNQHEQEQPRASTSRAVMPPRSEALTAVRG 254


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 385 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 296
           G G +    GG GS  P    + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 385 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 296
           G G +    GG GS  P    + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 385 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 296
           G G +    GG GS  P    + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 385 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 296
           G G +    GG GS  P    + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,197
Number of Sequences: 2352
Number of extensions: 15315
Number of successful extensions: 294
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)