Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0184
(421 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373... 31 0.50
06_01_1170 - 10002650-10004122 30 0.87
07_03_0846 - 21983581-21986055 29 1.1
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 28 3.5
03_05_0823 - 27970038-27970258,27970279-27970544,27970608-279706... 28 3.5
02_01_0490 + 3541056-3542276 28 3.5
01_06_1777 + 39818212-39819696 28 3.5
04_04_0478 - 25522862-25523000,25523138-25523310,25523450-25523755 27 4.6
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 27 4.6
02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 27 4.6
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 27 6.1
08_02_1081 + 24215323-24215335,24215450-24215572,24216241-242164... 27 6.1
01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171... 27 6.1
01_05_0118 + 18335065-18335553 27 6.1
11_07_0014 + 27379941-27379974,27381975-27382033,27382561-273827... 27 8.1
11_04_0340 - 16536571-16536705,16536820-16536951,16537265-165381... 27 8.1
09_02_0267 - 6485428-6485895,6488255-6488303,6488466-6488469,648... 27 8.1
06_01_0655 + 4742267-4742531,4743313-4744136 27 8.1
02_02_0156 - 7277793-7277875,7278535-7278638,7278808-7279211,727... 27 8.1
01_06_1637 - 38805609-38805719,38805872-38806017,38806115-388062... 27 8.1
>06_03_1055 -
27234824-27234838,27236087-27236125,27236322-27237388,
27237422-27237630,27237650-27238053
Length = 577
Score = 30.7 bits (66), Expect = 0.50
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -1
Query: 232 ASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGS 98
A+ A +GK + E E S+QCD T + +S RE ++R+P+ +
Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473
>06_01_1170 - 10002650-10004122
Length = 490
Score = 29.9 bits (64), Expect = 0.87
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 183 SRGSTVSISLPDSARLASALEAFRIIPRMVASHHRPLGECMNQMSA 320
S GS + P +A LA+ALE R+ A H PL E + +A
Sbjct: 298 SFGSMAQLQPPHAAALAAALERTRVAFVWAAGSHTPLPEGFEERAA 343
>07_03_0846 - 21983581-21986055
Length = 824
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 90 DLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASA 239
DL+D G +R +C+T S PD S VS+ LPD+A+ A A
Sbjct: 326 DLQDFTGGCKRNVPLQCQTN--SSSAQTQPDKFYSMVSVRLPDNAQSAVA 373
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 27.9 bits (59), Expect = 3.5
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -1
Query: 241 KAEASLAESGKDMLTVEP-RESGGSKQCDFTSRVSHSKRETR-RRSPFGSRRSMLSVFFL 68
K+ AS A G D P R GG K+ S + SKR + R + F +L L
Sbjct: 4 KSSASAAHQGGDAPAEAPRRRGGGGKRKSGGSSFTPSKRHAKERNAAFHVPPHLLHSGPL 63
Query: 67 TRASR 53
TRA+R
Sbjct: 64 TRAAR 68
>03_05_0823 -
27970038-27970258,27970279-27970544,27970608-27970657,
27971272-27971538,27971633-27972001,27972373-27973278
Length = 692
Score = 27.9 bits (59), Expect = 3.5
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 6/119 (5%)
Frame = +3
Query: 18 RHRTELYPDLRSR-DARVKKKTDSIDLRDPNGLRRRVSRFECET--RLVKSHCLEPPDSR 188
RH L ++RS D KT ++L GL + L SH L +
Sbjct: 144 RHVRMLTHEIRSTLDRHTILKTTLVELGGTLGLEECALWMPSRSGSSLQLSHTLRHQITV 203
Query: 189 GSTVSISLPDSARLASALEAFRIIPRMVASHHRPL-GECM-NQMSATAVPLV-LSSITI 356
GSTVSI+LP ++ S+ A I + RPL G + +++A VPL+ LS+ I
Sbjct: 204 GSTVSINLPVVNQVFSSNRAIIIPHTSPLARIRPLAGRYVPPEVAAVRVPLLHLSNFQI 262
>02_01_0490 + 3541056-3542276
Length = 406
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -2
Query: 339 VREEPQLRTFGSCTRRAAGGAKLPSAGLS*TPLRPKPA*PNPARICSLWSP 187
VR +PQ + AA AK +A S RP P P P ++ S+ SP
Sbjct: 250 VRSQPQPHPPAAAAAAAAAVAKPRAAIQSPARRRPSPPPPPPPQVASVDSP 300
>01_06_1777 + 39818212-39819696
Length = 494
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 183 SRGSTVSISLPDSARLASALEAFRIIPRMVASHHRP-LGECMN 308
+R T SI + + ++A +I+ RMV HHRP GE N
Sbjct: 399 TRKETFSILISGLCSESRFIDAAQIMERMVKGHHRPEAGEFNN 441
>04_04_0478 - 25522862-25523000,25523138-25523310,25523450-25523755
Length = 205
Score = 27.5 bits (58), Expect = 4.6
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +2
Query: 173 ASRLSGLHSEHIXXXXXXXXXXXRGVQDNPADGSFAPPAARRVHEPNVRNCGSSRTEQYY 352
A R+S + EH R + + P D F A+ +HE V+ + R E+YY
Sbjct: 58 AGRMSAVEEEHAEKVAALDAQYKRMMDEQPGDALFLRNYAQFLHE--VKG-DARRAEEYY 114
Query: 353 YR 358
R
Sbjct: 115 SR 116
>03_06_0253 -
32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 27.5 bits (58), Expect = 4.6
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 171 EPP-DSRGSTVSISLPD-SARLASALEAFRIIPRMVASHHRPLGECMNQMSATAVPLVLS 344
+PP DSR VSIS+PD + E+FR P RPLG ++ +++ L S
Sbjct: 403 QPPCDSRTLLVSISIPDWGSDDGITFESFRAAP-------RPLGNAVSYVNSAF--LARS 453
Query: 345 SITIATTSH 371
S+ ++ SH
Sbjct: 454 SVDGSSGSH 462
>02_01_0083 -
566201-567127,567223-567464,567623-567880,568173-568298,
568420-568489
Length = 540
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 213 ARICSLWSPESREALNNVTLLVAFRIQNARRDVEA 109
AR C W PESR ++ V ++A ++R+ A
Sbjct: 449 ARECLQWEPESRPTMSEVVQILATIAPSSRKHAAA 483
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 27.1 bits (57), Expect = 6.1
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 171 EPP-DSRGSTVSISLPDSARL-ASALEAFRIIPRMVASHHRPLGECMNQMSATAVPLVLS 344
+PP DSR +SIS+PD E FR P RP G ++ +++ L S
Sbjct: 399 QPPCDSRTLLISISIPDWCSYDGITFETFRAAP-------RPFGNAVSYVNSAF--LARS 449
Query: 345 SITIATTSH 371
S+ A+ SH
Sbjct: 450 SLDAASGSH 458
>08_02_1081 +
24215323-24215335,24215450-24215572,24216241-24216489,
24218517-24218720,24218864-24218993,24219610-24219679,
24219766-24219900,24219996-24220209,24220314-24220455,
24220630-24220851,24220997-24221195
Length = 566
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 181 SGGSKQCDFTSRVSHSKRETRRRSPFGSRRSML 83
S G+ Q T R HS E RRRS R +L
Sbjct: 212 SAGTDQMPNTPRSKHSATEQRRRSKINDRFQLL 244
>01_07_0124 +
41212728-41212922,41215156-41215210,41215336-41217128,
41217363-41217521,41217883-41218054,41218173-41218471,
41219060-41219368
Length = 993
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +3
Query: 72 KKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAF 251
KKT ++ + P+ R + + + +V S C D G+ ++ + R+ASA++AF
Sbjct: 566 KKTMAVVIASPSAGGRPRAFLKGASEVVLSRCSLVLDGTGNVEKLTDAKAKRVASAIDAF 625
>01_05_0118 + 18335065-18335553
Length = 162
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 223 AESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSR 95
A+ G + V P +GG+++ + ++ K T RR+ FG+R
Sbjct: 18 AQDGHRLPDVAPA-AGGTREPEHARLIARRKESTYRRTAFGNR 59
>11_07_0014 +
27379941-27379974,27381975-27382033,27382561-27382782,
27383727-27383810,27385054-27385131,27385716-27385832,
27385956-27386019,27386399-27386402,27386565-27386613,
27388973-27389440
Length = 392
Score = 26.6 bits (56), Expect = 8.1
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 57 DARVKKKTDSIDLRDPNGLRRRVSRFE-CETRLVKSHCLEPPDSRGSTVSISLPDSARLA 233
D KKK S + N R+RV+ FE +R + L S +T +LPD+ L
Sbjct: 253 DGEPKKKPTSTPSQKRNNKRKRVTAFERLWSRAGELRILRAMASHTNTHRSTLPDTCDLF 312
Query: 234 SAL 242
+ L
Sbjct: 313 ATL 315
>11_04_0340 - 16536571-16536705,16536820-16536951,16537265-16538106,
16538480-16538940,16539032-16540314,16540423-16541627,
16541857-16542157
Length = 1452
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 198 VSISLPDSARLASALEAFRI--IPRMVASHHRPLGECMNQMSATAVP 332
+S SL D S L I PR+V SH P M + S + +P
Sbjct: 986 ISTSLGDRNESLSGLHDLTIHDCPRLVVSHPLPFSAQMRRFSISGIP 1032
>09_02_0267 -
6485428-6485895,6488255-6488303,6488466-6488469,
6488849-6488912,6489036-6489152,6489737-6489814,
6491058-6491141,6492086-6492307,6492835-6492893,
6494894-6494927
Length = 392
Score = 26.6 bits (56), Expect = 8.1
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 57 DARVKKKTDSIDLRDPNGLRRRVSRFE-CETRLVKSHCLEPPDSRGSTVSISLPDSARLA 233
D KKK S + N R+RV+ FE +R + L S +T +LPD+ L
Sbjct: 253 DGEPKKKPTSTPSQKRNNKRKRVTAFERLWSRAGELRILRAMASHTNTHRSTLPDTCDLF 312
Query: 234 SAL 242
+ L
Sbjct: 313 ATL 315
>06_01_0655 + 4742267-4742531,4743313-4744136
Length = 362
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 90 DLRDPN-GLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLAS 236
++RDP G+R + F +++ E RG ++ PD A +AS
Sbjct: 129 EIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGKKAKVNFPDGAPVAS 178
>02_02_0156 -
7277793-7277875,7278535-7278638,7278808-7279211,
7279403-7279543,7279700-7279904,7279984-7280093
Length = 348
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2
Query: 273 LPSAGLS*TPLRPKPA*PNPAR 208
LP AG S + LRPKP P PAR
Sbjct: 299 LPKAGQS-SSLRPKPRDPAPAR 319
>01_06_1637 -
38805609-38805719,38805872-38806017,38806115-38806220,
38806347-38806424,38806682-38806735,38806997-38807075,
38807136-38807260,38807441-38807530,38807635-38807714,
38807837-38807963,38808076-38808158,38808309-38808438
Length = 402
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 310 WFMHSPSGRWCEATIRGIILNASKAEASLAESGKDMLTVE 191
WF+H G WC I + SK + S S K M VE
Sbjct: 66 WFIHLQGGAWCNT-----IEDCSKRKMSAYGSSKFMRAVE 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,816,707
Number of Sequences: 37544
Number of extensions: 249331
Number of successful extensions: 841
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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