Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0184
         (421 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   2.0  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   4.5  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    22   7.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    22   7.9  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 307 FMHSPSGRWCEATIRGIILNA 245
           F+   S RWCE T+  +I +A
Sbjct: 360 FLDRESCRWCECTLGDLIADA 380


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 193 EPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSM 86
           + R   GSK     S  + S+ E  RR+P    RSM
Sbjct: 106 DARPRFGSKAAAANSSATSSESEDERRTPPQDMRSM 141


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 251 QDNPADGSFAPPAARRVHEPNV 316
           QDN A+    PP+A +  +P V
Sbjct: 620 QDNTANNVIPPPSAYQQQQPPV 641


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = -3

Query: 368  ACRCDSNTAQY--ERNRSCGHLVHALAERPVVRSYHPRDYPERL*GRSQPSRIRQ 210
            A RC  N  +    R ++         ERP + S  PR    R   R++ +R+RQ
Sbjct: 1045 AVRCTRNDLRNVARRTQTVRQREEQCGERPSMPSSSPRTSERRANIRARMARLRQ 1099


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,378
Number of Sequences: 2352
Number of extensions: 8530
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)