Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0184
(421 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 0.77
AL132847-1|CAB63371.1| 375|Caenorhabditis elegans Hypothetical ... 28 3.1
AF040661-11|AAG24210.1| 211|Caenorhabditis elegans Hypothetical... 27 4.1
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 27 7.2
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 27 7.2
AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical... 27 7.2
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 26 9.5
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 26 9.5
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 26 9.5
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 26 9.5
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 26 9.5
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 26 9.5
AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical... 26 9.5
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 26 9.5
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 26 9.5
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 26 9.5
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.9 bits (64), Expect = 0.77
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -3
Query: 365 CRCDSNTAQYERNRSCGHLVHALAERPVVRSYHPRDYPER 246
CR +S+ + + H VH + E P +S HP+ +R
Sbjct: 404 CRVESSDSDSDSLNQDEHAVHTIEENPNTKSSHPKSENQR 443
>AL132847-1|CAB63371.1| 375|Caenorhabditis elegans Hypothetical
protein Y48G10A.2 protein.
Length = 375
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = -1
Query: 271 TIRGIILNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETR 119
+++G I + + ++ K ++ EP+E+ + D+ + ++HSK E +
Sbjct: 306 SLKGQIKSENYTSIAVTRLYKMLIRTEPKETALRRAADYLNELTHSKTEKK 356
>AF040661-11|AAG24210.1| 211|Caenorhabditis elegans Hypothetical
protein W10G11.15 protein.
Length = 211
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/58 (24%), Positives = 23/58 (39%)
Frame = -1
Query: 307 FMHSPSGRWCEATIRGIILNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 134
F + PSG WC G + AE S G + ++ R Q ++++ S
Sbjct: 46 FFNRPSGGWCMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARS 103
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 34 YIRTFGAVMHVLRKKPIASISAIQMGFDVASRVLNA 141
YIRT +VLRKKP S+ D +++NA
Sbjct: 264 YIRTVRGSQYVLRKKPSGSLLPKAHQVDREFKIMNA 299
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -2
Query: 249 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 100
T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -2
Query: 249 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 100
T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -2
Query: 249 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 100
T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 165 NVTLLVAFR-IQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQF 25
N L+AF + A+ D EAHL+ +RC R H G +I QF
Sbjct: 1134 NEKFLLAFALVLRAKYDHEAHLNLVNRCMRNVC-KTHFGETVDEIFQF 1180
>AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical
protein W10G11.6 protein.
Length = 426
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 307 FMHSPSGRWCEATIRGIILNASKAEASLAESGKDMLTVEPRE 182
F + PSG WC GI +AE + A G + ++ R+
Sbjct: 90 FTNRPSGGWCMRVFTGIHDAKIEAERACAAKGGTLTGLQNRD 131
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -2
Query: 162 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 22
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -2
Query: 162 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 22
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 26 N*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 133
N VI+GPSE CTC + + S +SK + + A+
Sbjct: 184 NEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -2
Query: 162 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 22
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -2
Query: 162 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 22
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -2
Query: 162 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 22
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -2
Query: 162 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 22
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical
protein W10G11.14 protein.
Length = 210
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 307 FMHSPSGRWCEATIRGIILNASKAEA 230
F + PSG WC G NA KA+A
Sbjct: 46 FFNRPSGGWCMRVFAG--FNAKKADA 69
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 26 N*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 133
N VI+GPSE CTC + + S +SK + + A+
Sbjct: 184 NEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 26 N*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 133
N VI+GPSE CTC + + S +SK + + A+
Sbjct: 184 NEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 26 N*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 133
N VI+GPSE CTC + + S +SK + + A+
Sbjct: 184 NEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,453,778
Number of Sequences: 27780
Number of extensions: 184774
Number of successful extensions: 574
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -