Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0181
         (559 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical pr...    36   0.026
AL032657-1|CAA21732.1|  377|Caenorhabditis elegans Hypothetical ...    31   0.43 
U39645-3|AAA80362.3|  439|Caenorhabditis elegans Gustatory recep...    30   0.98 
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z75714-11|CAB00063.2|  723|Caenorhabditis elegans Hypothetical p...    28   5.2  
Z75714-10|CAN99711.1|  721|Caenorhabditis elegans Hypothetical p...    28   5.2  
AF024500-4|AAB70365.1|  335|Caenorhabditis elegans Hypothetical ...    28   5.2  
Z75955-1|CAB00111.2|  796|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF328908-1|AAK01123.1|  796|Caenorhabditis elegans voltage-gated...    27   9.1  
AF319616-1|AAG49526.1|  796|Caenorhabditis elegans CLC-type chlo...    27   9.1  

>Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical
           protein C27C12.7 protein.
          Length = 829

 Score = 35.5 bits (78), Expect = 0.026
 Identities = 21/82 (25%), Positives = 34/82 (41%)
 Frame = +1

Query: 154 DTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKDQSHSSLLFRTTNHSVIHSIAPFFLST 333
           D   +R+ LPK T D    + F   YP      +   +  ++ + NH ++ +  P  LS 
Sbjct: 282 DREVNRIFLPKYTDDDSYVEYFELPYPKAGVQNNTLVTQYIWDSENHKIVETAPPNELSA 341

Query: 334 SNNLTCSSRRSWSTMKENYSPI 399
           +N         W TM  N S +
Sbjct: 342 ANGDYYVLTNKWITMPRNGSDL 363


>AL032657-1|CAA21732.1|  377|Caenorhabditis elegans Hypothetical
           protein Y47H9C.1 protein.
          Length = 377

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +1

Query: 193 YDGFPFQLFVFVYPYEPTPKDQSHSSLLFRTTNHSVIHSIAPFFLSTSNNLTCSSRRSWS 372
           Y GFP    V VYP    P    +S +LF       + S+A F+++T+N  +   +  + 
Sbjct: 175 YAGFPLDSKVNVYPIFSNPITIQNSEVLFPNVETFSL-SLAAFYITTNNGFSFKIKPGYY 233

Query: 373 TMK-ENYSPIYLT 408
            +   N + +Y T
Sbjct: 234 NINGTNTTSVYST 246


>U39645-3|AAA80362.3|  439|Caenorhabditis elegans Gustatory receptor
           family protein 2 protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = +1

Query: 247 PKDQSHSSLLFRTTNHSVIHSIAPFFLSTSNNLTCSSRRSWSTMKENYSPIY--LTFLTI 420
           P   SHS++   T  H+V  ++A     T      SSR  W+       PIY  L  L +
Sbjct: 2   PPPSSHSNIFHSTFKHTVKETMAN-AKKTMIAKILSSRNKWAICDRTLYPIYYLLLILGL 60

Query: 421 HQIKRNYNALI 453
           +Q  R  N+L+
Sbjct: 61  NQSIRPNNSLL 71


>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
 Frame = +1

Query: 232 PYEPTPKDQS----HSSLLFRTTNHSVIHSIAPFFLSTSNNLTCSSRRSWS-TMKENYSP 396
           P  PTP   S    HS+  F + +   +  I PF +S ++ +  SS ++ S      Y P
Sbjct: 161 PIHPTPPVSSTPLRHSAPSFASDSQQFLSPIKPFEISFNSTVDTSSNQTGSHDHSIQYQP 220

Query: 397 IYLTFL--TIHQIKRNYNALI 453
           +   ++   +H +  +Y AL+
Sbjct: 221 LTHLYVPYVMHSLNSSYGALL 241


>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
 Frame = +1

Query: 232 PYEPTPKDQS----HSSLLFRTTNHSVIHSIAPFFLSTSNNLTCSSRRSWS-TMKENYSP 396
           P  PTP   S    HS+  F + +   +  I PF +S ++ +  SS ++ S      Y P
Sbjct: 161 PIHPTPPVSSTPLRHSAPSFASDSQQFLSPIKPFEISFNSTVDTSSNQTGSHDHSIQYQP 220

Query: 397 IYLTFL--TIHQIKRNYNALI 453
           +   ++   +H +  +Y AL+
Sbjct: 221 LTHLYVPYVMHSLNSSYGALL 241


>Z75714-11|CAB00063.2|  723|Caenorhabditis elegans Hypothetical
           protein ZC434.6b protein.
          Length = 723

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 367 WSTMKENYSPIYLTFLTIHQIKRNYNALIRKSKRTLTITVYNS 495
           W++    YS  Y   L ++ I+R+  + ++ SK    I +YNS
Sbjct: 74  WNSFYPKYSGKYWALLPVNLIRRDTISQLKSSKCLSGIVLYNS 116


>Z75714-10|CAN99711.1|  721|Caenorhabditis elegans Hypothetical
           protein ZC434.6a protein.
          Length = 721

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 367 WSTMKENYSPIYLTFLTIHQIKRNYNALIRKSKRTLTITVYNS 495
           W++    YS  Y   L ++ I+R+  + ++ SK    I +YNS
Sbjct: 74  WNSFYPKYSGKYWALLPVNLIRRDTISQLKSSKCLSGIVLYNS 116


>AF024500-4|AAB70365.1|  335|Caenorhabditis elegans Hypothetical
           protein K06H6.6 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 369 VYHEGELFPYLFNIPHYTPDK 431
           VY  G L PY + +PH+TP K
Sbjct: 302 VYRNGGLNPYDYYLPHWTPLK 322


>Z75955-1|CAB00111.2|  796|Caenorhabditis elegans Hypothetical
           protein R07B7.1 protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = -3

Query: 338 FEVLRKNGAIEWITEWFVVRNNRLEWL*SLGVGSYG*TNTNSWKGNPSYVPLGSI 174
           F  +  +  + WI  WF  R+  L W      G +   + N W+  P ++ +G I
Sbjct: 312 FSAMISSFTVNWILSWFNGRSGWLSWTGLANFGVFENKDYNIWE-IPLFLLIGII 365


>U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical
           protein T26C11.2 protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +3

Query: 255 SEPFKSVVPDNKPFGYPFDRPV-LPQYFKQPNMFFKKVLVYHEGELFPYLFNIPHYTP 425
           SEPF   +P +KP   PF  P+  P+   +P     K +  H+ + FP     P   P
Sbjct: 14  SEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKP-KPKPMPKHKPKPFPKPMLFPKPMP 70


>AF328908-1|AAK01123.1|  796|Caenorhabditis elegans voltage-gated
           chloride channelCLH-6 protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = -3

Query: 338 FEVLRKNGAIEWITEWFVVRNNRLEWL*SLGVGSYG*TNTNSWKGNPSYVPLGSI 174
           F  +  +  + WI  WF  R+  L W      G +   + N W+  P ++ +G I
Sbjct: 312 FSAMISSFTVNWILSWFNGRSGWLSWTGLANFGVFENKDYNIWE-IPLFLLIGII 365


>AF319616-1|AAG49526.1|  796|Caenorhabditis elegans CLC-type
           chloride channel CLH-6 protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = -3

Query: 338 FEVLRKNGAIEWITEWFVVRNNRLEWL*SLGVGSYG*TNTNSWKGNPSYVPLGSI 174
           F  +  +  + WI  WF  R+  L W      G +   + N W+  P ++ +G I
Sbjct: 312 FSAMISSFTVNWILSWFNGRSGWLSWTGLANFGVFENKDYNIWE-IPLFLLIGII 365


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,504,853
Number of Sequences: 27780
Number of extensions: 270173
Number of successful extensions: 719
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)