Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0180
(429 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical... 28 3.3
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 27 4.3
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 27 4.3
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 27 4.3
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 27 5.7
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 27 7.5
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 27 7.5
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 27 7.5
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 27 7.5
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 27 7.5
Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical pr... 26 10.0
Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical p... 26 10.0
Z74042-4|CAA98533.1| 265|Caenorhabditis elegans Hypothetical pr... 26 10.0
AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical... 26 10.0
AL021488-2|CAA16367.2| 378|Caenorhabditis elegans Hypothetical ... 26 10.0
AJ561211-1|CAD99213.1| 82|Caenorhabditis elegans NAS-21 protei... 26 10.0
>AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical
protein C31B8.1 protein.
Length = 229
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 428 NPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSP 321
+P + P +Q LF S+G LP I + SSP
Sbjct: 19 SPFKASPSNQKLFISFGVGLPIFFQMCIFTASYSSP 54
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = -2
Query: 251 KVRREYPDTAANAVLFA---FRT--ISPFYRIPWNSNAQAEKKTLPGP 123
K+ +E D A N + FR I+PF P+ +N Q + +PGP
Sbjct: 435 KIEKEIADVAENQIRRIEENFRNPFIAPFAFFPYQNNFQMAPQNVPGP 482
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 235 IRTPPQMRCSSRSEPYLPSIGFHGT 161
I T Q + SS +P+LP++GF GT
Sbjct: 299 IVTISQGKASSLYDPHLPTVGFDGT 323
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -3
Query: 211 CSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIETVP 38
C++ P+L I T+ +RQ + P+L +A H + FK E T+P
Sbjct: 80 CTTNFTPFLRPITVPVTKGVRQGDPISPNLFSACLEHVFRKLSCIEFKGEAEDYNTIP 137
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 199 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 47
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1216 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1264
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 199 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 47
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1205 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1253
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 199 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 47
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1205 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1253
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 199 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 47
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1216 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1264
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 199 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 47
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1205 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1253
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 199 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 47
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1205 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1253
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 164 NSNAQAEKKTLPG-PLGGVFRPLWVTPSNTRF*RRGNDY*NGSAAGFRNRNRIPF 3
NSN A G P+ RP + N +F + + NG+ + FRN+N F
Sbjct: 20 NSNQAAHHGNHAGQPIFHGARPFGASNGNGKFRNQNTNRNNGNGSHFRNQNNNTF 74
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKT---SVRRGNPKWPEDAAERS 128
P P PE SGT + S + T +V + PEDAAE S
Sbjct: 355 PTPAPEAASGTAD-VTASPINTAFPAVVTSSTPMPEDAAEVS 395
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKT---SVRRGNPKWPEDAAERS 128
P P PE SGT + S + T +V + PEDAAE S
Sbjct: 306 PTPAPEAASGTAD-VTASPINTAFPAVVTSSTPMPEDAAEVS 346
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKT---SVRRGNPKWPEDAAERS 128
P P PE SGT + S + T +V + PEDAAE S
Sbjct: 392 PTPAPEAASGTAD-VTASPINTAFPAVVTSSTPMPEDAAEVS 432
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKT---SVRRGNPKWPEDAAERS 128
P P PE SGT + S + T +V + PEDAAE S
Sbjct: 419 PTPAPEAASGTAD-VTASPINTAFPAVVTSSTPMPEDAAEVS 459
>Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 130 PDLSAASSGHFGLPRRTLVFKDEGTIIETVPLPGSGIGTGFP 5
P S+GH R +++ +P PGSG+G G P
Sbjct: 312 PSEHLLSNGHVRSGIRDKARGVAASLLSLLPRPGSGVGNGGP 353
>Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 130 PDLSAASSGHFGLPRRTLVFKDEGTIIETVPLPGSGIGTGFP 5
P S+GH R +++ +P PGSG+G G P
Sbjct: 312 PSEHLLSNGHVRSGIRDKARGVAASLLSLLPRPGSGVGNGGP 353
>Z74042-4|CAA98533.1| 265|Caenorhabditis elegans Hypothetical
protein T11F9.5 protein.
Length = 265
Score = 26.2 bits (55), Expect = 10.0
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 413 GPQSQSLFRSYGSNLPTSLTYIILS 339
GP++ FR+ GS +P+ Y++++
Sbjct: 204 GPKNSKYFRTMGSQIPSYFDYLMIN 228
>AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical
protein Y51H4A.13 protein.
Length = 591
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -1
Query: 162 LERSGRKENSSRTSRRRLQATLG----YPVEHSFLKTRERLLKRF 40
+E SGR+E +R LQA++ + + F KT+ + K+F
Sbjct: 525 VEMSGRREQETRNKESILQASISIMKYFVLYCGFTKTKSHIRKKF 569
>AL021488-2|CAA16367.2| 378|Caenorhabditis elegans Hypothetical
protein Y45F10A.4 protein.
Length = 378
Score = 26.2 bits (55), Expect = 10.0
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 108 EDAAERSGKSFLFCLSVRVPWNPIEGRYGSEREEHRICGGVRILSADLEIQVRDVRGDVA 287
+DAA+ +G +VR PW + G S E I + + D+ I + + G VA
Sbjct: 145 KDAADEAGTKIRGGQTVRCPWLLLGGVATSVAHESEIIKVDQAVPGDVLILTKPIGGQVA 204
>AJ561211-1|CAD99213.1| 82|Caenorhabditis elegans NAS-21 protein
protein.
Length = 82
Score = 26.2 bits (55), Expect = 10.0
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 413 GPQSQSLFRSYGSNLPTSLTYIILS 339
GP++ FR+ GS +P+ Y++++
Sbjct: 48 GPKNSKYFRTMGSQIPSYFDYLMIN 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,852,049
Number of Sequences: 27780
Number of extensions: 235276
Number of successful extensions: 816
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -