Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0176
         (605 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    46   7e-04
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    40   0.046
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    36   0.98 
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    33   6.9  
UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;...    32   9.2  

>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 46.0 bits (104), Expect = 7e-04
 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
 Frame = +3

Query: 138 GKCFR*CSSCDDPRISPLTSQYECPQLSLL---IITSEF*KPQNRTEIIFYYS 287
           GKCFR C S ++ RISPLTS+Y+CPQ + +   +I     + Q  TE+ F+ S
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQATPINWPVIKRTPSRIQTMTEVTFFPS 311


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 79

 Score = 39.9 bits (89), Expect = 0.046
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = -3

Query: 129 FHQSRTKVRGSKAIRYRPSSNRK 61
           F   RTKVRGSK IRYRPSSN K
Sbjct: 6   FRCQRTKVRGSKTIRYRPSSNHK 28


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 35.5 bits (78), Expect = 0.98
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = -3

Query: 129 FHQSRTKVRGSKAIRYRPSSNRK 61
           FH  RTKV GSK IRY PS N K
Sbjct: 6   FHCQRTKVGGSKMIRYHPSLNHK 28


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 550 SWNYRGCWHQT 582
           SWNYR CWHQT
Sbjct: 7   SWNYRSCWHQT 17


>UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 389

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +2

Query: 149 SLMFVLRRSKNFTSNVAIRMPPVIPINHYLG 241
           S+M V+ RS  FT    IR+PP+  I+H+LG
Sbjct: 20  SVMGVVERSAVFTRQRDIRLPPIPGISHHLG 50


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,216,713
Number of Sequences: 1657284
Number of extensions: 9955168
Number of successful extensions: 23379
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23372
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)