Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0176
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051801-1|AAK93225.1|  635|Drosophila melanogaster LD31582p pro...    29   6.5  
AE014296-2163|AAF49897.3|  635|Drosophila melanogaster CG10632-P...    29   6.5  

>AY051801-1|AAK93225.1|  635|Drosophila melanogaster LD31582p
           protein.
          Length = 635

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/85 (18%), Positives = 38/85 (44%)
 Frame = +2

Query: 269 DHILLFHARNIQAAFLARFEHSNLFNVNCRPTSTLTEEHRDRILILNRRFLERRLTDDIL 448
           +H L+ H +       ++ E    F       ST+  E+  + LIL ++++    TD+++
Sbjct: 25  NHALVKHFKKFLTHPQSQNEARKRFKTYVTLLSTIKNENNQKFLILRKKYVNECPTDEVV 84

Query: 449 RKRVSITADACTDSAAHKCNTSFST 523
            + V+  +     S+    + +F +
Sbjct: 85  ERAVAAASGIPEPSSPGGASLNFDS 109


>AE014296-2163|AAF49897.3|  635|Drosophila melanogaster CG10632-PB
           protein.
          Length = 635

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/85 (18%), Positives = 38/85 (44%)
 Frame = +2

Query: 269 DHILLFHARNIQAAFLARFEHSNLFNVNCRPTSTLTEEHRDRILILNRRFLERRLTDDIL 448
           +H L+ H +       ++ E    F       ST+  E+  + LIL ++++    TD+++
Sbjct: 25  NHALVKHFKKFLTHPQSQNEARKRFKTYVTLLSTIKNENNQKFLILRKKYVNECPTDEVV 84

Query: 449 RKRVSITADACTDSAAHKCNTSFST 523
            + V+  +     S+    + +F +
Sbjct: 85  ERAVAAASGIPEPSSPGGASLNFDS 109


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,542,978
Number of Sequences: 53049
Number of extensions: 486033
Number of successful extensions: 1198
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)