Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0175
         (777 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2048|AAF58145.1|  532|Drosophila melanogaster CG16801-P...    30   4.1  
AE013599-2047|AAM68536.1|  744|Drosophila melanogaster CG16801-P...    30   4.1  
X54061-1|CAA37996.1| 1163|Drosophila melanogaster 205 K microtub...    29   9.4  
BT003276-1|AAO25033.1| 1163|Drosophila melanogaster LD12965p pro...    29   9.4  
AE014297-4842|AAN14301.1| 1185|Drosophila melanogaster CG1483-PB...    29   9.4  
AE014297-4841|AAF57214.1| 1163|Drosophila melanogaster CG1483-PA...    29   9.4  

>AE013599-2048|AAF58145.1|  532|Drosophila melanogaster CG16801-PA,
           isoform A protein.
          Length = 532

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 461 GRSLMYE-SWLICPCP*CACNRIPMLTNTSLNRRARARTVLPTRSGPSSNAL 309
           GRSL++   W +C C  CA +  P      +  R R R  LPT +GP +N L
Sbjct: 4   GRSLLFRVPWYVCLCV-CAESAEP-----GVYWRLRLRLGLPTLAGPHTNTL 49


>AE013599-2047|AAM68536.1|  744|Drosophila melanogaster CG16801-PB,
           isoform B protein.
          Length = 744

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 461 GRSLMYE-SWLICPCP*CACNRIPMLTNTSLNRRARARTVLPTRSGPSSNAL 309
           GRSL++   W +C C  CA +  P      +  R R R  LPT +GP +N L
Sbjct: 4   GRSLLFRVPWYVCLCV-CAESAEP-----GVYWRLRLRLGLPTLAGPHTNTL 49


>X54061-1|CAA37996.1| 1163|Drosophila melanogaster 205 K
            microtubule-associated proteinprotein.
          Length = 1163

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = -2

Query: 374  LNRRARARTVLPTRSGPSSNALPPRNRSRFNVPGTTFTGRIRTDRPTIPAI*DGILSPHP 195
            ++  AR      T S  SS A  P   ++ + PG+  + ++R        +   +LSP  
Sbjct: 910  VSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKVRPAATMTAPVKPKVLSPRS 969

Query: 194  TGSNIFIVTEVP 159
            T S+   V +VP
Sbjct: 970  TISSTTTVRKVP 981


>BT003276-1|AAO25033.1| 1163|Drosophila melanogaster LD12965p protein.
          Length = 1163

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = -2

Query: 374  LNRRARARTVLPTRSGPSSNALPPRNRSRFNVPGTTFTGRIRTDRPTIPAI*DGILSPHP 195
            ++  AR      T S  SS A  P   ++ + PG+  + ++R        +   +LSP  
Sbjct: 910  VSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKVRPAATMTAPVKPKVLSPRS 969

Query: 194  TGSNIFIVTEVP 159
            T S+   V +VP
Sbjct: 970  TISSTTTVRKVP 981


>AE014297-4842|AAN14301.1| 1185|Drosophila melanogaster CG1483-PB,
            isoform B protein.
          Length = 1185

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = -2

Query: 374  LNRRARARTVLPTRSGPSSNALPPRNRSRFNVPGTTFTGRIRTDRPTIPAI*DGILSPHP 195
            ++  AR      T S  SS A  P   ++ + PG+  + ++R        +   +LSP  
Sbjct: 932  VSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKVRPAATMTAPVKPKVLSPRS 991

Query: 194  TGSNIFIVTEVP 159
            T S+   V +VP
Sbjct: 992  TISSTTTVRKVP 1003


>AE014297-4841|AAF57214.1| 1163|Drosophila melanogaster CG1483-PA,
            isoform A protein.
          Length = 1163

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = -2

Query: 374  LNRRARARTVLPTRSGPSSNALPPRNRSRFNVPGTTFTGRIRTDRPTIPAI*DGILSPHP 195
            ++  AR      T S  SS A  P   ++ + PG+  + ++R        +   +LSP  
Sbjct: 910  VSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKVRPAATMTAPVKPKVLSPRS 969

Query: 194  TGSNIFIVTEVP 159
            T S+   V +VP
Sbjct: 970  TISSTTTVRKVP 981


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,512,724
Number of Sequences: 53049
Number of extensions: 734725
Number of successful extensions: 1601
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)