Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0173
         (555 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81649-1|CAA57309.1|  850|Homo sapiens gastric mucin protein.          33   0.67 
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.              32   1.2  

>X81649-1|CAA57309.1|  850|Homo sapiens gastric mucin protein.
          Length = 850

 Score = 33.1 bits (72), Expect = 0.67
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 321 RSRETISHLCYTSHVSLQCQTRASSTGSSFPADSPKP 211
           R+RE  S LCY   + +QC T  + + SS PA +  P
Sbjct: 453 RNREQASGLCYNYQIRVQCCTPLACSTSSSPAQTTPP 489


>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
          Length = 2448

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 321  RSRETISHLCYTSHVSLQCQTRASSTGSSFPADSPKP 211
            R+RE  S LCY   + +QC T    + SS PA +  P
Sbjct: 1457 RNREQASGLCYNYQIRVQCCTPLPCSTSSSPAQTTPP 1493


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,526,029
Number of Sequences: 237096
Number of extensions: 1774343
Number of successful extensions: 3594
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3594
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)