Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0164
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.1  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 206 ASTSCPKHQPTPL*TLLHQHHGVYPSTTSGV 298
           A+TS P H P P     H +   +P    GV
Sbjct: 154 AATSLPLHYPPPPPVYTHHYARYHPYPNFGV 184


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 52  PICWMSTETKGCRS 11
           P+CW S   KG  S
Sbjct: 759 PVCWQSNCKKGASS 772


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = +1

Query: 4    RHSFCILWSPYSSNKW 51
            +HS  + W P +  +W
Sbjct: 1009 QHSLVVYWKPPAREEW 1024


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 395 CFCRFAVSVLIFYTLG 442
           C+C +++S+    TLG
Sbjct: 554 CYCYYSISIRPISTLG 569


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,459
Number of Sequences: 336
Number of extensions: 2967
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)