Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0164
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 37 0.008
06_02_0199 - 12940459-12940689,12940787-12940930 29 1.6
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 29 1.6
12_01_0736 + 6582371-6585370 29 2.1
12_01_0718 + 6339982-6342981 29 2.1
11_02_0012 - 7346282-7347136,7347234-7347593 29 2.7
07_03_1719 - 28987426-28987851,28987954-28988231,28988329-28988530 29 2.7
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 29 2.7
11_06_0204 + 21191611-21192807 28 3.6
10_03_0011 + 7034101-7034122,7035077-7035699 28 3.6
08_01_0289 - 2332454-2333011 28 3.6
05_07_0250 + 28669593-28669660,28669759-28669817,28670144-286702... 28 3.6
03_01_0441 + 3418622-3420988 28 3.6
08_02_1146 + 24678142-24678258,24678550-24678587,24678997-246790... 28 4.8
12_01_0740 + 6646471-6649407 27 6.3
12_01_0727 + 6446283-6449300 27 6.3
12_01_0722 + 6355972-6359031 27 6.3
09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,158... 27 6.3
01_01_0648 - 4917123-4917651,4917728-4917857,4917958-4918093 27 6.3
10_08_0685 - 19875801-19875980,19876074-19876277,19876392-198767... 27 8.4
07_03_1525 + 27448257-27448582,27450741-27450973,27451280-274529... 27 8.4
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 27 8.4
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -1
Query: 388 KFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVKKG 248
+ +GD RT+ Y+D L+G TVLD CGTGI S+ K G
Sbjct: 268 EMLGDK-VRTEAYRDALLGNPSLMNGATVLDVGCGTGILSLFAAKAG 313
>06_02_0199 - 12940459-12940689,12940787-12940930
Length = 124
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -3
Query: 353 LQRLLDRS-LEEQRLQDCSGRRLWYW 279
L+R D + +E RL+D +GRR W+W
Sbjct: 65 LRRAADEAKVEVARLRDVAGRRFWWW 90
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 364 RTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVKKGLK 242
RT Y+ ++ K K V+D CGTGI S+ + G K
Sbjct: 67 RTDAYRSAIMHHQKFIEGKVVMDVGCGTGILSVFCARAGAK 107
>12_01_0736 + 6582371-6585370
Length = 999
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 37 SSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 177
SSNK +NE P + + N+++ N+ S + LA I QSS+ F
Sbjct: 887 SSNKLSNEIPEKLASLNFLATLNL-----SYNMLAGRIPQSSHFSTF 928
>12_01_0718 + 6339982-6342981
Length = 999
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 37 SSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 177
SSNK +NE P + + N+++ N+ S + LA I QSS+ F
Sbjct: 887 SSNKLSNEIPEKLASLNFLATLNL-----SYNMLAGRIPQSSHFSTF 928
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 34 YSSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 177
Y KW+N FPR T +G+ + SV S + Y+GF+
Sbjct: 162 YFKGKWSNPFPRERT----TTGKFHRLDGSSVDAPFMSSREDQYIGFY 205
>07_03_1719 - 28987426-28987851,28987954-28988231,28988329-28988530
Length = 301
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 206 ASTSCPKHQPTPL*TLLHQHHGVY--PSTTSGVQNSLAAVVLQ 328
ASTS K +P P L+H H+G + P++ + +S A+ Q
Sbjct: 214 ASTSTLKTEPPPPANLMHNHYGYFSLPASATNYNHSSGAMADQ 256
>03_02_1023 + 13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 257 EEGFKVVSVDASDKMLKHALKARWEKRKNPKYDDWV 150
EEGF VV D+ ++ + LK W WV
Sbjct: 1693 EEGFNVVVADSCQRVFVYGLKILWNLENRAAIVSWV 1728
>11_06_0204 + 21191611-21192807
Length = 398
Score = 28.3 bits (60), Expect = 3.6
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +1
Query: 19 ILWSPYSSNKWANEFPRHMTASNW 90
++W P + +W +FP ++ NW
Sbjct: 137 VVWDPMTGRRWRLDFPGYLEDFNW 160
>10_03_0011 + 7034101-7034122,7035077-7035699
Length = 214
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 49 WANEFPRHMTASNWVSGRNVSMSCGSVSQLASSI 150
W+ E P + A W+ GR M+ QLA S+
Sbjct: 115 WSQESPSILRAGTWLYGRRRQMASSLCEQLAYSL 148
>08_01_0289 - 2332454-2333011
Length = 185
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 127 VSQLASSITQSSYLGFFLFSQRALRACFNILSEASTDTTLNPSSPA 264
V +L +S GF + RA R + + +A+ ++PSSPA
Sbjct: 50 VRELGASPEPEEVTGFVAAAMRANREAYGVSYDAAEKVRVDPSSPA 95
>05_07_0250 +
28669593-28669660,28669759-28669817,28670144-28670248,
28670983-28671019,28671446-28671542,28671700-28671781,
28671870-28671939,28672049-28672212,28672897-28672940,
28673021-28673176,28673273-28673494,28673736-28673883,
28673947-28674034,28675032-28675159,28675259-28675323,
28675380-28675426,28675427-28675539,28676003-28676019
Length = 569
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -3
Query: 272 LHDAGEEGFKVVSVDASDKMLKHALKARWEKRKNPKYDDWVIEEANWETLPQDI-ETFLP 96
LH+ ++G V + + +K A+ KRK + DD V+ + + +P ++ +T+L
Sbjct: 221 LHEEAQQGGASVKNEQEQQKMKGQQPAKSSKRKKRRKDDEVMMDNDQIMIPGNVYQTWLK 280
Query: 95 D 93
D
Sbjct: 281 D 281
>03_01_0441 + 3418622-3420988
Length = 788
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 169 GFFLFSQRALRACFNILSEASTDTT 243
GFF+ QR LR+ +LSE+ ++T
Sbjct: 326 GFFIVEQRVLRSADGLLSESQVEST 350
>08_02_1146 +
24678142-24678258,24678550-24678587,24678997-24679012,
24679874-24680002,24680073-24680229,24680337-24680530,
24680668-24680916,24681196-24681309,24681949-24681990,
24682402-24682572,24682932-24683104,24683378-24683624,
24684046-24684130,24684401-24684510,24684714-24684977,
24685885-24685950,24686431-24686525,24686780-24686858
Length = 781
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 34 YSSNKWANEFPRHMTASNWVSGRNVS 111
Y SN WA+EF +H + G N++
Sbjct: 289 YGSNGWASEFEQHQSQMAMTGGMNMA 314
>12_01_0740 + 6646471-6649407
Length = 978
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 37 SSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 177
SSNK + E P+ + + N+++ N+ S + LA I QSS+ F
Sbjct: 866 SSNKLSGEIPQELASLNFLATLNL-----SYNMLAGRIPQSSHFSTF 907
>12_01_0727 + 6446283-6449300
Length = 1005
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 37 SSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFFLFSQRALRACFNI 216
SSNK + E P+ + + N+++ N+ S + LA I QSS+ F FS + +
Sbjct: 893 SSNKLSGEIPQELPSLNFLATLNL-----SYNMLAGRIPQSSH--FLTFSNASFEGNIGL 945
Query: 217 LSEASTDTTLNPSSP 261
+ P+ P
Sbjct: 946 CGPPLSKQCSYPTEP 960
>12_01_0722 + 6355972-6359031
Length = 1019
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 37 SSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 177
SSNK + E P+ + + N+++ N+ S + LA I QSS+ F
Sbjct: 907 SSNKLSGEIPQELASLNFLATLNL-----SYNMLAGRIPQSSHFSTF 948
>09_01_0102 +
1582793-1582898,1582988-1583093,1584115-1584172,
1584676-1584745,1585132-1585197,1586374-1586429,
1587992-1588078,1588819-1589139,1589827-1589946,
1590747-1590881,1591529-1591605,1591681-1591756,
1592800-1592874,1592971-1593075,1593299-1593374,
1594482-1594617,1594702-1594804,1595186-1595298,
1596907-1597111,1597173-1597301,1597403-1597517,
1597710-1597795,1599108-1599203,1599615-1599751,
1600374-1600476,1601809-1601888,1602013-1602091,
1602241-1602298,1602489-1602586,1602673-1602767,
1602861-1602918
Length = 1074
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 388 KFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVKKGLKWCRLMLRTR 215
K + D N R YK+F+ G+ + G VL+ D + ++G + ++ T+
Sbjct: 762 KALQDENDRRACYKEFIDGVYREVGPSNVLEKEIERVKDKLQTAEQGKAYYEGIMETK 819
>01_01_0648 - 4917123-4917651,4917728-4917857,4917958-4918093
Length = 264
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 25 WSPYSSNKWANEFPRHMTASNWVSGRNVS--MSCGSVSQL 138
WSP + + RH TA NW+S N + CG +L
Sbjct: 17 WSPEEDDALRDYINRHGTAGNWISLPNKAGLRRCGKSCRL 56
>10_08_0685 -
19875801-19875980,19876074-19876277,19876392-19876724,
19876834-19877115,19877210-19877425,19879752-19880024
Length = 495
Score = 27.1 bits (57), Expect = 8.4
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -1
Query: 490 NYGSGPGIHSRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGC 311
NYG GP H + + +G+ DG+ K K I + T+ +DF + K N
Sbjct: 88 NYGKGPFNHGNAKDLFGDGI--FAIDGEKWKQQRK-IASYDFSTRALRDFSCAVFKRNAA 144
Query: 310 K 308
K
Sbjct: 145 K 145
>07_03_1525 +
27448257-27448582,27450741-27450973,27451280-27452919,
27453129-27453575
Length = 881
Score = 27.1 bits (57), Expect = 8.4
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = -3
Query: 272 LHDAGEEGFKVVSVDASDKMLKHALKARWEKRKNPKYDDWVIEEANWETLP--QDIETFL 99
L AG++G + S +D MLK ++ Y W WE + Q I
Sbjct: 438 LDAAGDQGQRQGSAGDTDIMLKTPTRSTHMNNPRSTYKCWESTYKCWERISEYQSIPKER 497
Query: 98 PDTQFDAVICLGNSFAHLL 42
P T D + LG S + L
Sbjct: 498 PLTDDDLLPALGMSIVYSL 516
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 168 GVLSLLPASFESVLQHLVRSINRHHFKPFFTSIMESIPVPQAASRTVLQP 317
G S P S + HL R++N H K F + E + V + R V P
Sbjct: 127 GKASPPPESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLP 176
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,262,030
Number of Sequences: 37544
Number of extensions: 335167
Number of successful extensions: 1135
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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