Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0164
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6783| Best HMM Match : Porphobil_deamC (HMM E-Value=5.8) 93 1e-19
SB_23832| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.057
SB_23673| Best HMM Match : DUF855 (HMM E-Value=0.52) 33 0.13
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_11413| Best HMM Match : Adaptin_N (HMM E-Value=0.00025) 31 0.40
SB_38421| Best HMM Match : Pox_A32 (HMM E-Value=0.022) 30 1.2
SB_51608| Best HMM Match : Lipase_GDSL (HMM E-Value=0.016) 29 1.6
SB_21867| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_42689| Best HMM Match : Spectrin (HMM E-Value=0) 29 2.1
SB_21429| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_10027| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.31) 29 2.1
SB_3054| Best HMM Match : RVT_1 (HMM E-Value=1.6e-09) 29 2.1
SB_7810| Best HMM Match : RVT_1 (HMM E-Value=2.8026e-45) 29 2.1
SB_52412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_25926| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_22533| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_20773| Best HMM Match : DNA_pol_B_exo (HMM E-Value=2.5e-37) 28 4.9
SB_24571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_53765| Best HMM Match : 3HCDH_N (HMM E-Value=9.2e-12) 27 6.5
SB_40388| Best HMM Match : Kinesin (HMM E-Value=0) 27 6.5
SB_37039| Best HMM Match : OTCace_N (HMM E-Value=0) 27 6.5
SB_21451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_36636| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_35913| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 8.6
SB_33327| Best HMM Match : Tombus_movement (HMM E-Value=3.5) 27 8.6
SB_15366| Best HMM Match : rve (HMM E-Value=0.00011) 27 8.6
SB_45708| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_18357| Best HMM Match : Phage_integrase (HMM E-Value=0.0063) 27 8.6
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_1853| Best HMM Match : RVT_1 (HMM E-Value=5.99994e-41) 27 8.6
>SB_6783| Best HMM Match : Porphobil_deamC (HMM E-Value=5.8)
Length = 382
Score = 93.1 bits (221), Expect = 1e-19
Identities = 37/72 (51%), Positives = 53/72 (73%)
Frame = -1
Query: 463 SRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACG 284
+RSLG+P+ G+ DQYADGKAAK W +IG +RT++Y++F LL+ VLD +CG
Sbjct: 157 TRSLGVPATGIPDQYADGKAAKVWQHYIGGHKKRTESYREFFCNLLRERNIHNVLDVSCG 216
Query: 283 TGIDSMMLVKKG 248
TG+DS+ML++ G
Sbjct: 217 TGVDSIMLLENG 228
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = -3
Query: 257 EEGFKVVSVDASDKMLKHALKARWEKRKNPKYDDWVI 147
E GF V SVDASDKMLK AL+ RW +RK +D W I
Sbjct: 226 ENGFCVTSVDASDKMLKDALRIRWNRRKEEPFDKWGI 262
>SB_23832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 34.3 bits (75), Expect = 0.057
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 394 WNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVKKGLK 242
W+ + + QR YK + + +NGC VLD G+GI SM V+ G K
Sbjct: 136 WHFRMLNDRQRNLAYKKAISNAV-SNGCDIVLDIGSGSGILSMFAVQAGAK 185
>SB_23673| Best HMM Match : DUF855 (HMM E-Value=0.52)
Length = 380
Score = 33.1 bits (72), Expect = 0.13
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Frame = -1
Query: 442 SEGVKDQYADGKAAKTWNKFIGDS-----NQRTQNYKDFLIGLLKNNGCKTVLDAACGTG 278
S G KD+ G + T + DS RT Y++ + K VLD CGTG
Sbjct: 137 SNGAKDKPKPGASEMTSADYYFDSYAHFDEVRTLTYRNSMYHNKHLFRDKIVLDVGCGTG 196
Query: 277 IDSMMLVKKGLK 242
I SM K G K
Sbjct: 197 ILSMFAAKAGAK 208
>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1622
Score = 31.5 bits (68), Expect = 0.40
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -1
Query: 493 LNYGSGPGIHSRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFL---IGLLK 323
++Y + +H R+L + + +AD + K + + D RT++Y+ + G K
Sbjct: 96 VSYVTSEEVHRRNLAWQDD---EYFADYGSLKIHLEMLKDK-PRTESYRMAIEQGAGYFK 151
Query: 322 NNGCKTVLDAACGTGIDSMMLVKKG 248
+ K VLD CGTGI S+ ++G
Sbjct: 152 D---KVVLDVGCGTGILSLFCAREG 173
>SB_11413| Best HMM Match : Adaptin_N (HMM E-Value=0.00025)
Length = 435
Score = 31.5 bits (68), Expect = 0.40
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = -3
Query: 353 LQRLLDRSLEEQRLQDCSGRRLWYWDRLHDAGEEGFKVVSVDASDKMLKHALKARWEKR 177
L RLL ++++ D R L Y+ RL +AG E K + D SD+ L KAR +++
Sbjct: 319 LGRLLAHFIDKEVNTDVHDRALLYY-RLLEAGVEQAKRIVCDVSDRTLGSPRKARKDEK 376
>SB_38421| Best HMM Match : Pox_A32 (HMM E-Value=0.022)
Length = 1144
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = -3
Query: 302 SGRRLWYWDRLHDAGEEGFKVV----SVDASDKMLKHALKARWEKRKNP 168
+GRRL W+RL A +E F+VV S AS+ + L+AR E P
Sbjct: 846 AGRRLAEWNRLKRAKKETFRVVQHVGSPAASEPQGREGLRARAEGIHTP 894
>SB_51608| Best HMM Match : Lipase_GDSL (HMM E-Value=0.016)
Length = 290
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 1 LRHSFCILWSPYSSNKWANEFPRHMTASNWVS--GRNVSMSCGSVSQ-LASSITQS 159
+R C L Y +N FPRHM AS S RN S G++S L SI S
Sbjct: 75 MRDFDCSLRKEYLNNYRTYRFPRHMPASRTPSLPFRNASFLLGAISHPLVRSILYS 130
>SB_21867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = -3
Query: 338 DRSLEEQRLQDCS-GRRLWYWDRLHDAGEEGFKVV----SVDASDKMLKHALKARWEKRK 174
D+ EQ + GRRL W+RL+ A +E +VV S AS+ + L+AR E
Sbjct: 236 DKQAAEQAAHEPEPGRRLAEWNRLNRAEKEALRVVQHVGSPVASEPQGREGLRARAEDIH 295
Query: 173 NP 168
P
Sbjct: 296 TP 297
>SB_42689| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1317
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 359 AELQRLLDRSLEEQRLQDCSGRRLWYWDRLHDAGEEGFKVVSVDASDKMLKH-ALKARWE 183
A LQRL D +Q +QD W ++ A EE ++ +S + K++KH A +A +
Sbjct: 331 AALQRLRDALQLQQFIQDAEDMYDWLNEKHQVASEESYRDLS-NIQGKVMKHEAFEAELQ 389
Query: 182 KRK 174
K
Sbjct: 390 ANK 392
>SB_21429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 PVGFFNYPIIIFGVLSLLPASFESVLQHLVRSIN 233
P G F + + FG L+ PA+F+ +++H +R +N
Sbjct: 765 PFGLFEFTRMPFG-LTNAPATFQRLMEHCLRDLN 797
>SB_10027| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.31)
Length = 635
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = -3
Query: 302 SGRRLWYWDRLHDAGEEGFKVV----SVDASDKMLKHALKARWEKRKNP 168
+GRRL W+RL+ A +E F+VV S AS+ + L+ R E P
Sbjct: 568 AGRRLAEWNRLNRAKKETFRVVQHVGSPVASEPQEREGLRTRAEGIHTP 616
>SB_3054| Best HMM Match : RVT_1 (HMM E-Value=1.6e-09)
Length = 829
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 PVGFFNYPIIIFGVLSLLPASFESVLQHLVRSIN 233
P G F + + FG L+ PA+F+ +++H +R +N
Sbjct: 569 PFGLFEFTRMPFG-LTNAPATFQRLMEHCLRDLN 601
>SB_7810| Best HMM Match : RVT_1 (HMM E-Value=2.8026e-45)
Length = 732
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 PVGFFNYPIIIFGVLSLLPASFESVLQHLVRSIN 233
P G F + + FG L+ PA+F+ +++H +R +N
Sbjct: 631 PFGLFEFTRMPFG-LTNAPATFQRLMEHCLRDLN 663
>SB_52412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 28.3 bits (60), Expect = 3.7
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +3
Query: 120 RECLPVGFFNYPIIIFGVLSLL---PASFESVLQHLVRSINRHHFKPFFTSIM-ESIPVP 287
R L VG+ Y + + LL P + +L LVR R FKP F +I +
Sbjct: 130 RRDLAVGYCQYDHLASVLTQLLTDRPEASTEILDELVRDKKRAVFKPNFDTIQDQQDDST 189
Query: 288 QAASRTVLQPLFFKRPIK 341
+ Q LF +RP K
Sbjct: 190 EVLLARTQQTLFERRPEK 207
>SB_25926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -1
Query: 193 LAGRRERTPNMMIG*LKKPTGRHSRKTSRRFYQIPSSTPSYVSGTRSP 50
+ GR TP IG TG SR+++ F P YV G P
Sbjct: 23 MVGRYRETPGPCIGCFNSITGPGSRESNAHFTPHKCYLPRYVPGIGVP 70
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Frame = -3
Query: 302 SGRRLWYWDRLHDAGEEGFKVVS-----VDASDKMLKHALKARWE 183
+GRRL W+RL+ A +E +VV V + + L+ +L+AR E
Sbjct: 1590 AGRRLAEWNRLNRAKKETLRVVQHVGSPVASEPQSLRESLRARAE 1634
>SB_22533| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -3
Query: 143 EANWETLPQDIETFLPDT 90
EA+WETLP+++E +PDT
Sbjct: 340 EADWETLPKNVE--IPDT 355
>SB_20773| Best HMM Match : DNA_pol_B_exo (HMM E-Value=2.5e-37)
Length = 1652
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 101 LPDTQFDAVICLGNSFAHLLDEYGDQR 21
+PD + +IC S + L+EYG+Q+
Sbjct: 981 MPDNELFDLICENRSMSKTLEEYGEQK 1007
>SB_24571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 868
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = -3
Query: 302 SGRRLWYWDRLHDAGEEGFKVV----SVDASDKMLKHALKARWE 183
+GRRL W+RL+ A +E +VV S AS+ + L+AR E
Sbjct: 170 AGRRLAKWNRLNRAKKETLRVVQHVGSPVASESQGREGLRARAE 213
>SB_53765| Best HMM Match : 3HCDH_N (HMM E-Value=9.2e-12)
Length = 120
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 180 LLPASFESVLQHLVRSINRHHFKP-FFTSIMESIPVPQAASRTVLQPLFFKRPIKKS 347
++P+ F LQ R I H P ++ ++E IP P + + Q + + I +S
Sbjct: 35 IMPSKFTESLQLRQRCIVAHPINPPYYVPLVEVIPAPWTDASVIEQTIKLMKDIGQS 91
>SB_40388| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 500
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = -3
Query: 293 RLWYWDRLHDAGEEGFKVVSVDASDKMLKHALKARWEKRKNPKYDDWVIEEANWETLPQD 114
RL RL D F S + K +K AL + R+NPK D ++ E QD
Sbjct: 361 RLLLRARLGDKTNTAFLTTSKEQG-KAIKQALYLELQARRNPKDDINILNEHCIFNYEQD 419
Query: 113 IETFLP 96
I P
Sbjct: 420 IVRIFP 425
>SB_37039| Best HMM Match : OTCace_N (HMM E-Value=0)
Length = 233
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 334 GLLKNNGCKTVLDAACGTGIDSMMLVKKGLKWCRLMLRTRC*STLSKLAGRRERTPNMMI 155
G +NN ++L+AA TG+D +L K W L C + K G+ T ++
Sbjct: 163 GDARNNMGNSMLEAAALTGLDLRLLAPKAC-WPEESLVAECSALAEKHGGKITLTEDVAA 221
Query: 154 G 152
G
Sbjct: 222 G 222
>SB_21451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 151 TQSSYLGFFLFSQRALRACFNILSEASTDTTLNPSSPAS 267
T ++ GF + +QR + ++ AST ++NP S +S
Sbjct: 251 TSNTLQGFIVLNQRQRQPTLILVRTASTSASMNPRSDSS 289
>SB_36636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 94 IPSSTPSYVSGTRSPICWMST 32
+P TP++ SG+R CW T
Sbjct: 35 LPEKTPNWKSGSRVSACWSCT 55
>SB_35913| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1176
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 119 AGVSPSWLLQLPNHHIWGSFSSPSEL*ERASTSCP-KHQPTPL*TLLHQHHGVYPSTTSG 295
A +S WL+ L N + SFS + + +TS +P+P + H + + T+G
Sbjct: 136 ATLSKPWLIALVNSRLRKSFSCQANVYVEVNTSVAIPPRPSPPRFISHTYRTLTVGWTAG 195
Query: 296 VQNSLAAV 319
+ N+ V
Sbjct: 196 IWNASTPV 203
>SB_33327| Best HMM Match : Tombus_movement (HMM E-Value=3.5)
Length = 527
Score = 27.1 bits (57), Expect = 8.6
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = -3
Query: 335 RSLEEQRLQDCSGRRL-WY-WDRLHDAG---EEGFKVVSVDASDKMLKHALKARWEKRKN 171
R LEE+R Q SG + W W L++ EEG K +V A + +H A +K KN
Sbjct: 89 RLLEEER-QFTSGLSMDWEGWQMLNEVPRRKEEGTKKAAVAAGASIAEHIKHAIADKVKN 147
Query: 170 P 168
P
Sbjct: 148 P 148
>SB_15366| Best HMM Match : rve (HMM E-Value=0.00011)
Length = 1178
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = -3
Query: 302 SGRRLWYWDRLHDAGEEGFKVV----SVDASDKMLKHALKARWE 183
+GRRL W+RL+ A +E +VV S AS+ + L+AR E
Sbjct: 634 AGRRLAEWNRLNRAKKETLRVVKHVGSPVASELQGREGLRARAE 677
>SB_45708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1510
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 132 PVGFFNYPIIIFGVLSLLPASFESVLQHLVRSIN 233
P G F + + FG L+ PA+F+ +++H +R N
Sbjct: 663 PFGLFEFTRMPFG-LTNAPATFQRLMEHCLRDPN 695
>SB_18357| Best HMM Match : Phage_integrase (HMM E-Value=0.0063)
Length = 683
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 332 SLEEQRLQDCSGRRLWYWDRLHDAGEEG 249
SL E + D SGRRLW++ A EG
Sbjct: 284 SLPENAMFDLSGRRLWFFSPFPCAEFEG 311
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 27.1 bits (57), Expect = 8.6
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = -3
Query: 335 RSLEEQRLQDCSGRRL-WY-WDRLHDAG---EEGFKVVSVDASDKMLKHALKARWEKRKN 171
R LEE+R Q SG + W W L++ EEG K +V A + +H A +K KN
Sbjct: 634 RLLEEER-QFTSGLSMDWEGWQMLNEVPRRKEEGTKKAAVAAGASIAEHIKHAIADKVKN 692
Query: 170 P 168
P
Sbjct: 693 P 693
>SB_1853| Best HMM Match : RVT_1 (HMM E-Value=5.99994e-41)
Length = 1069
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/46 (23%), Positives = 27/46 (58%)
Frame = +3
Query: 132 PVGFFNYPIIIFGVLSLLPASFESVLQHLVRSINRHHFKPFFTSIM 269
P G + Y + FG L+ P +F+SV++H+++ ++ + + ++
Sbjct: 651 PFGLYQYCRMPFG-LAGAPGTFQSVVEHMLQVLDANDIMAYLGDVI 695
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,271,997
Number of Sequences: 59808
Number of extensions: 374550
Number of successful extensions: 1674
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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