Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0164
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr...    31   0.35 
AF101317-1|AAC69234.1|  330|Caenorhabditis elegans Seven tm rece...    31   0.46 
AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical ...    29   1.9  
AC006674-4|AAF39940.1|  402|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z81555-6|CAJ85762.1|  709|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z81555-5|CAB04517.2|  694|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AL110477-12|CAB54335.1|  348|Caenorhabditis elegans Hypothetical...    28   3.3  
AF025471-10|AAB71059.1|  326|Caenorhabditis elegans Hypothetical...    28   3.3  
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AF068714-1|AAC17808.1|  254|Caenorhabditis elegans Hypothetical ...    28   4.3  
U67949-2|AAB07560.2|  368|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U64844-9|AAB18309.1|  330|Caenorhabditis elegans Serpentine rece...    27   5.7  
AC006661-1|AAF39886.2|  168|Caenorhabditis elegans Hypothetical ...    27   5.7  
Z98860-1|CAB11544.1|  677|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z68134-4|CAA92224.1|  567|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U28944-13|AAA68372.1|  365|Caenorhabditis elegans Hypothetical p...    27   10.0 
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
            T06E4.1 protein.
          Length = 1295

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = -1

Query: 382  IGDSNQRTQNYKDFLIGL-LKNNGCKTVLDAACGTGIDSMMLVKKGLKWCRLMLRTRC*S 206
            +G+S  + +N K+ LIG  + N      L+A  G  ++ M  +KK L+     ++ R   
Sbjct: 889  VGES--QVENVKEELIGAKIMNKEMVDELNAKLGDALEGMEELKKSLEVSEAKVQRREEE 946

Query: 205  TLSKLAGRRERTPNMMIG*LKKPTGRHSRKTSR 107
             +++++  R++   + +   +  + +HS +TSR
Sbjct: 947  LIAQVSKHRDQQEQLQLTLDELKSAQHSTETSR 979


>AF101317-1|AAC69234.1|  330|Caenorhabditis elegans Seven tm
           receptor protein 16 protein.
          Length = 330

 Score = 31.1 bits (67), Expect = 0.46
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +3

Query: 135 VGFFNYPIIIFGVLSLLPASFESVLQHLVRSINRHHFKPFFTS 263
           +G + Y II+F V  +  ASFE VL  ++ S N  +   FFTS
Sbjct: 38  LGPYKYLIILFSVFGIAFASFEFVLYPVLHSYNSGYI--FFTS 78


>AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical
            protein Y59A8B.6 protein.
          Length = 968

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = -3

Query: 314  LQDCSGRRLWYWDRLHDAGEEGFKVVSVDASDK------MLKHALKARWEKRKNPKYDDW 153
            LQ+C G    + + +   G  G +  S+DA  K      +L  A +  W +RK  K  +W
Sbjct: 831  LQECEGSGKLWAEAIWMEGPHGRRAKSIDALKKCEHNPHVLIAAARLFWSERKIKKAREW 890

Query: 152  VIEEANWETLPQDIETFLPDTQFDAV 75
             +   N +  P + + F     F+ +
Sbjct: 891  FVRAVNLD--PDNGDAFANFLAFEQI 914


>AC006674-4|AAF39940.1|  402|Caenorhabditis elegans Hypothetical
           protein K12H6.11 protein.
          Length = 402

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +1

Query: 19  ILWSPYSSNKWANEFPRHMTASNWVSGRNVSMSCGSVSQ 135
           ILWS Y S  W N   R   A  +  G   +M  G V Q
Sbjct: 276 ILWSAYRSKAWINPLNRGNCARFFSHGCKANMELGRVFQ 314


>Z81555-6|CAJ85762.1|  709|Caenorhabditis elegans Hypothetical
           protein F58E10.1b protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = -1

Query: 193 LAGRRERTPNMMIG*LKKPTGRHSRKTSRRFYQIPSSTPSYVSGTRSPICWMSTE 29
           L G  + TP    G + + + RHS  +      IP S+ S V      I W  ++
Sbjct: 157 LLGSLQETPRRRAGIVSRQSSRHSVASGHSLASIPFSSNSSVKSASFRIVWEGSQ 211


>Z81555-5|CAB04517.2|  694|Caenorhabditis elegans Hypothetical
           protein F58E10.1a protein.
          Length = 694

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = -1

Query: 193 LAGRRERTPNMMIG*LKKPTGRHSRKTSRRFYQIPSSTPSYVSGTRSPICWMSTE 29
           L G  + TP    G + + + RHS  +      IP S+ S V      I W  ++
Sbjct: 142 LLGSLQETPRRRAGIVSRQSSRHSVASGHSLASIPFSSNSSVKSASFRIVWEGSQ 196


>AL110477-12|CAB54335.1|  348|Caenorhabditis elegans Hypothetical
           protein Y113G7B.17 protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = -1

Query: 430 KDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVKK 251
           KD Y D  A    ++ +     RT  Y++ +         K V+D   GTGI SM   K 
Sbjct: 24  KDYYFDSYAHFGIHEEMLKDEVRTTTYRNSIYHNSHLFKDKVVMDVGSGTGILSMFAAKA 83

Query: 250 GLK 242
           G K
Sbjct: 84  GAK 86


>AF025471-10|AAB71059.1|  326|Caenorhabditis elegans Hypothetical
           protein R52.1 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +2

Query: 281 STTSGVQNSLAAVVLQETDQEVFVVLRSLITISDEL-VPCFCRFAVSVLIFYTLG 442
           +T  G+ N+L      + D EV + L      +DE  + C  RF V  LIF T+G
Sbjct: 270 NTPYGI-NALMPFDHNDMDPEVVMALLKKSLATDEFYLDCIMRFTVICLIFITVG 323


>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
            H08M01.2b protein.
          Length = 1341

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +3

Query: 174  LSLLPASFESVLQHLVRSINRHHFKPFFTSIMESIPVPQAASRTVLQPLF 323
            L++LP S + VLQ+LV  + +    P   ++M S  + +  + T+ +P+F
Sbjct: 1262 LAILPVSNQKVLQYLVTHLTKVSCSP--KTVMNSNNLSKVWTPTLFRPVF 1309


>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
           protein C36B1.8b protein.
          Length = 1052

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
 Frame = +1

Query: 55  NEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFFLF----SQRALRACFNILS 222
           N   +  T  + ++G N + +  + +Q +S I Q+S     +     S        + ++
Sbjct: 50  NHQQKKSTDGSTMNGNNATATAAATTQNSSQIGQNSNSSHSVTNDNTSSNNASTSTSSIT 109

Query: 223 EASTDTTLNPSSPASWSLSQYHKRR 297
             +T TT  PSS  S S +QY  +R
Sbjct: 110 STTTTTTTVPSSQQSQSQNQYSHQR 134


>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
           protein C36B1.8a protein.
          Length = 1049

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
 Frame = +1

Query: 55  NEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFFLF----SQRALRACFNILS 222
           N   +  T  + ++G N + +  + +Q +S I Q+S     +     S        + ++
Sbjct: 50  NHQQKKSTDGSTMNGNNATATAAATTQNSSQIGQNSNSSHSVTNDNTSSNNASTSTSSIT 109

Query: 223 EASTDTTLNPSSPASWSLSQYHKRR 297
             +T TT  PSS  S S +QY  +R
Sbjct: 110 STTTTTTTVPSSQQSQSQNQYSHQR 134


>AF068714-1|AAC17808.1|  254|Caenorhabditis elegans Hypothetical
           protein B0348.5 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -1

Query: 499 RILNYGSGPGIHSRSLGIPSEGVKDQYADGKAAKTWNKFIG 377
           R+L  GSGP I SR  GIP +     Y    A+  WN+ IG
Sbjct: 143 RMLYGGSGPQIPSRGGGIPID-----YNMNIASNHWNRGIG 178


>U67949-2|AAB07560.2|  368|Caenorhabditis elegans Hypothetical
           protein F55A4.2 protein.
          Length = 368

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 49  WANEFPRHMTASNWVSGRNVSMSCGSVSQLASSITQSSYLGFF 177
           WA  F R++T    +       +C S S L+++I      GFF
Sbjct: 112 WAKNFRRYLTDGILIIQLFTLFNCASSSHLSNTIPPCKNFGFF 154


>U64844-9|AAB18309.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein212 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +3

Query: 129 LPVGFFNYPIIIFGVLSLLPASFESVLQHLVRSINRHHFKPFFTSIMESIPVP 287
           +P+     PII  GV SLL    +++   +V  ++ H F  F T +M  I VP
Sbjct: 250 IPIIILIIPIIYVGVTSLLYFHNQAINNFIVIIVSSHGF--FSTIVMICIHVP 300


>AC006661-1|AAF39886.2|  168|Caenorhabditis elegans Hypothetical
          protein H20J04.6 protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 4  RHSFCILWSPYSSNKWANEFPRHMTASN 87
          R+ +CI+W+P     W   F  HM  +N
Sbjct: 15 RYPYCIVWTPIPCLTWFFPFIGHMGIAN 42


>Z98860-1|CAB11544.1|  677|Caenorhabditis elegans Hypothetical
           protein Y26G10.1 protein.
          Length = 677

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 156 IIIFGVLSLLPASFESVLQHLVRSINRHHFKPFFTSIMESIPV 284
           +IIFG LSLL  SF + L   +R  +    +  ++   E + V
Sbjct: 486 LIIFGTLSLLKTSFSTFLALFLRLFDDSTVEDLYSPYYEVVQV 528


>Z68134-4|CAA92224.1|  567|Caenorhabditis elegans Hypothetical
           protein T27A8.5 protein.
          Length = 567

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 19  ILWSPYSSNKWANEFPRHMTASNWVS 96
           +L SP+ S  WANE   H+  S  +S
Sbjct: 82  VLGSPFFSRGWANESKHHLHLSTLLS 107


>U28944-13|AAA68372.1|  365|Caenorhabditis elegans Hypothetical
           protein C18A3.1 protein.
          Length = 365

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -3

Query: 167 KYDDWVIEEANWETLPQDIET---FLPDTQFDAV 75
           KY D V +E N +T  +  E    F+PD+QF+A+
Sbjct: 12  KYYDSVFKELNLKTRSELYEISSKFMPDSQFEAI 45


>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
            K10D2.3 protein.
          Length = 1425

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 361  FFDYYLR*TCSMFLPLCRQRTDLLHPRREYPR 456
            +FDYY R     F+  CR+   L    +E+PR
Sbjct: 1253 YFDYYSRFDFRNFVVQCRREMILSKMEKEWPR 1284


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,620,181
Number of Sequences: 27780
Number of extensions: 274066
Number of successful extensions: 1093
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)