Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0164
(499 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 1.3
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 1.3
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 23 2.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 4.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 4.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 4.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 4.1
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 5.4
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 5.4
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 5.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 5.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 5.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 9.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.4
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.4 bits (48), Expect = 1.3
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 434 CKRSVR*RQSGKNMEQVHRR**SKNAELQRLLDRSLEEQRLQ 309
CKR S +N + ++ R SKN + ++ +++ E +R Q
Sbjct: 38 CKRVYSSLNSLRNHKSIYHRQHSKNEQQRKEMEQMREREREQ 79
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 484 GSGPGIHSRSLGIP 443
G GP H RSLGIP
Sbjct: 334 GIGPKEHLRSLGIP 347
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 22.6 bits (46), Expect = 2.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 246 KPFFTSIMESIPVPQAASRTVLQPLFFKRPIKKSL 350
+ F I +IPVPQAA++ ++ ++P + L
Sbjct: 46 RKFHKPITLTIPVPQAANKGMINQYGGEQPTLRLL 80
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 4.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 466 HSRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKN 320
+SRS + K++ + K +TW + D +R ++ + +I L N
Sbjct: 39 YSRSREREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLSN 87
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 4.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 466 HSRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKN 320
+SRS + K++ + K +TW + D +R ++ + +I L N
Sbjct: 39 YSRSREREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLSN 87
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 4.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 466 HSRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKN 320
+SRS + K++ + K +TW + D +R ++ + +I L N
Sbjct: 39 YSRSREREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLSN 87
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 4.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 466 HSRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKN 320
+SRS + K++ + K +TW + D +R ++ + +I L N
Sbjct: 39 YSRSREREQKSYKNENSYRKYRETWKERSRDRTERERSREPKIISSLSN 87
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = +2
Query: 341 EVFVVLRSLITISDELVPCFCRFAVSVLIFY 433
E+ + R + + + ++PC +V++L+FY
Sbjct: 206 EIRLRRRPMFYVFNLILPCILINSVALLVFY 236
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 494 FKLWQRTRYSLAFLGYSLRGCK 429
+ +W+ T S A LG+ + G K
Sbjct: 399 YMVWRETISSTATLGFRVEGIK 420
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 494 FKLWQRTRYSLAFLGYSLRGCK 429
+ +W+ T S A LG+ + G K
Sbjct: 314 YMVWRETISSTATLGFRVEGIK 335
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 494 FKLWQRTRYSLAFLGYSLRGCK 429
+ +W+ T S A LG+ + G K
Sbjct: 633 YMVWRETISSTATLGFRVEGIK 654
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 5.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 276 IPVPQAASRTVLQPL 320
+PVPQ T+L P+
Sbjct: 796 VPVPQVNDSTILSPV 810
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 20.6 bits (41), Expect = 9.4
Identities = 6/17 (35%), Positives = 8/17 (47%)
Frame = +1
Query: 49 WANEFPRHMTASNWVSG 99
W N P + +NW G
Sbjct: 661 WLNHSPNYDQVTNWYMG 677
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 125 VSPSWLLQLPNHHIW 169
V PS +L+LP IW
Sbjct: 362 VYPSAVLELPGSSIW 376
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 125 VSPSWLLQLPNHHIW 169
V PS +L+LP IW
Sbjct: 415 VYPSAVLELPGSSIW 429
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,111
Number of Sequences: 438
Number of extensions: 3324
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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