Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0161
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.2  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   2.9  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   3.8  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   3.8  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   3.8  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   5.0  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   5.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.8  
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    23   8.8  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    23   8.8  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    23   8.8  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    23   8.8  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 136 NSSRTSRRRLQATL 95
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 445 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 350
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 397 LALRTGACRVWTGSGCGRCRVWSM 468
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 461 QTRHRPHPLPVQTRHAPVLRANPYSEVT 378
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 461 QTRHRPHPLPVQTRHAPVLRANPYSEVT 378
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 19/63 (30%), Positives = 24/63 (38%)
 Frame = -3

Query: 198 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSNTRF*RRGNDY*NGSAAGSGI 19
           F T+   Y    N+ A +   T  G   G FRP+  TP N       N       AG G+
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPENGYAEEPSNASYPRFIAGPGV 271

Query: 18  GTG 10
             G
Sbjct: 272 AMG 274


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 19/63 (30%), Positives = 24/63 (38%)
 Frame = -3

Query: 198 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSNTRF*RRGNDY*NGSAAGSGI 19
           F T+   Y    N+ A +   T  G   G FRP+  TP N       N       AG G+
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPENGYAEEPSNASYPRFIAGPGV 271

Query: 18  GTG 10
             G
Sbjct: 272 AMG 274


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -2

Query: 295 YEPARHLHVHPSPDFQGPQRVSGHRRKCGA 206
           ++   H   H +    GP  +S  R  CGA
Sbjct: 655 HQGQHHAQHHSNGTHHGPSLMSSARESCGA 684


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 258 LIFKVRREYPDTAAN 214
           LI K+R EYPD   N
Sbjct: 47  LISKIREEYPDRIMN 61


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 258 LIFKVRREYPDTAAN 214
           LI K+R EYPD   N
Sbjct: 47  LISKIREEYPDRIMN 61


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 258 LIFKVRREYPDTAAN 214
           LI K+R EYPD   N
Sbjct: 47  LISKIREEYPDRIMN 61


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 258 LIFKVRREYPDTAAN 214
           LI K+R EYPD   N
Sbjct: 47  LISKIREEYPDRIMN 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,442
Number of Sequences: 2352
Number of extensions: 15875
Number of successful extensions: 38
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)