Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0158
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    45   8e-07
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    36   5e-04
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   6.3  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 44.8 bits (101), Expect = 8e-07
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 82  VRQPRLNHKPFT--VTIDIKSDVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFV 255
           VR   L H+PFT  +T++ +S+       ++FL PK DE G P+   D  + F ELD F 
Sbjct: 472 VRFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMFIELDKFT 531

Query: 256 KRL 264
             L
Sbjct: 532 VNL 534



 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
 Frame = +3

Query: 270 GQSQITRSSTDFAFFKEDSLPMAEIYKLLD----QGKIPTDMFNSSDT-MPSRLMLPKGT 434
           GQ+ ITR+S+  +     ++P    ++ LD    QG      FN      P  +++PKGT
Sbjct: 537 GQNTITRASSQSSV----TIPFERTFRNLDLNRPQGGEELAQFNFCGCGWPQHMLIPKGT 592

Query: 435 YDGFPFQLFVFVYPYE 482
            +G   QLFV +  Y+
Sbjct: 593 PEGMKSQLFVMISNYD 608



 Score = 24.6 bits (51), Expect = 0.89
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 521 PDNKPFGYPFDR 556
           PD +  GYPFDR
Sbjct: 635 PDRRSMGYPFDR 646


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 35.5 bits (78), Expect = 5e-04
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 82  VRQPRLNHKPFTVTIDIKSDVATN-AVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVK 258
           VR   L ++ FT  I + +         ++FL P++DE G P+   +    F ELD F  
Sbjct: 472 VRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDMFIELDRFA- 530

Query: 259 RLTLASLR*RVHLLTLHSSKKTL 327
                SL+   + +T HS++ +L
Sbjct: 531 ----VSLKQGTNTITRHSTESSL 549



 Score = 34.3 bits (75), Expect = 0.001
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
 Frame = +3

Query: 270 GQSQITRSSTDFAFFKEDSLPMAEIYKLLDQGKIPT-----DMFNSSDT-MPSRLMLPKG 431
           G + ITR ST+ +     ++P    ++ LD  + PT       FN      P  ++LPKG
Sbjct: 536 GTNTITRHSTESSL----TIPFERTFRNLDANR-PTGGDALSEFNFCGCGWPQHMLLPKG 590

Query: 432 TYDGFPFQLFVFVYPY 479
           T  G+P  LFV +  Y
Sbjct: 591 TEAGYPCHLFVMISNY 606



 Score = 26.6 bits (56), Expect = 0.22
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = +2

Query: 521 PDNKPFGYPFDRPVLP-----QYFKQPNMFFKKVLV 613
           PD +  GYPFDR         Q F  PNM  ++V++
Sbjct: 634 PDRRSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVI 669


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 73  GYKVRQPRLNHKPFTVTI 126
           G K   P LNHKP  +TI
Sbjct: 253 GPKQELPDLNHKPLNLTI 270


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 73  GYKVRQPRLNHKPFTVTI 126
           G K   P LNHKP  +TI
Sbjct: 145 GPKQELPDLNHKPLNLTI 162


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 322 SSLKNAKSVDERVI*DWP 269
           S L+NAK VDE ++ + P
Sbjct: 471 SQLRNAKKVDEAILEERP 488


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +3

Query: 432 TYDGFPFQLFVFVYPYEPTPKESEPLSLLFRTTNHSVIHSIAPFFL 569
           TY+    Q+F+ V  +     ++     + R+T  SV++S+  F L
Sbjct: 198 TYETDEVQIFIDVVQHNRPEFKAARFFSIDRSTLFSVLNSLTTFLL 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,566
Number of Sequences: 336
Number of extensions: 3517
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)