Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0158
         (778 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical pr...    35   0.056
U41034-6|AAU05557.1|  538|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U41034-5|AAA82381.1|  567|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AL032657-1|CAA21732.1|  377|Caenorhabditis elegans Hypothetical ...    29   3.7  
U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF024500-4|AAB70365.1|  335|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical
           protein C27C12.7 protein.
          Length = 829

 Score = 35.1 bits (77), Expect = 0.056
 Identities = 21/82 (25%), Positives = 33/82 (40%)
 Frame = +3

Query: 396 DTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPLSLLFRTTNHSVIHSIAPFFLST 575
           D   +R+ LPK T D    + F   YP       +     ++ + NH ++ +  P  LS 
Sbjct: 282 DREVNRIFLPKYTDDDSYVEYFELPYPKAGVQNNTLVTQYIWDSENHKIVETAPPNELSA 341

Query: 576 SNNLTCSSRRSWSTMKENYSPI 641
           +N         W TM  N S +
Sbjct: 342 ANGDYYVLTNKWITMPRNGSDL 363


>U41034-6|AAU05557.1|  538|Caenorhabditis elegans Hypothetical
           protein M02D8.4c protein.
          Length = 538

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 112 FTVTIDIKS-DVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVKRLTLASLR 282
           F++ +D  S DV     V  F+G  + E  F FS+E+   N  +L W ++   + S+R
Sbjct: 263 FSIGVDHNSPDVVAARKVAKFIGTTHHE--FYFSIEEGIKNLRKLIWHLESYDVTSIR 318


>U41034-5|AAA82381.1|  567|Caenorhabditis elegans Hypothetical
           protein M02D8.4a protein.
          Length = 567

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 112 FTVTIDIKS-DVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVKRLTLASLR 282
           F++ +D  S DV     V  F+G  + E  F FS+E+   N  +L W ++   + S+R
Sbjct: 263 FSIGVDHNSPDVVAARKVAKFIGTTHHE--FYFSIEEGIKNLRKLIWHLESYDVTSIR 318


>AL032657-1|CAA21732.1|  377|Caenorhabditis elegans Hypothetical
           protein Y47H9C.1 protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +3

Query: 435 YDGFPFQLFVFVYPYEPTPKESEPLSLLFRTTNHSVIHSIAPFFLSTSNNLTCSSRRSWS 614
           Y GFP    V VYP    P   +   +LF       + S+A F+++T+N  +   +  + 
Sbjct: 175 YAGFPLDSKVNVYPIFSNPITIQNSEVLFPNVETFSL-SLAAFYITTNNGFSFKIKPGYY 233

Query: 615 TMK-ENYSPIYLT 650
            +   N + +Y T
Sbjct: 234 NINGTNTTSVYST 246


>U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical
           protein F59A6.3 protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 12  STSMPSTLSTSVKKNSRALSRLQGPSTTS*P 104
           +TS P+T S     + R LS   GPSTTS P
Sbjct: 499 TTSGPTTSSGPSTVSERTLSTTSGPSTTSGP 529


>AF024500-4|AAB70365.1|  335|Caenorhabditis elegans Hypothetical
           protein K06H6.6 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 611 VYHEGELFPYLFNIPHYTPDK 673
           VY  G L PY + +PH+TP K
Sbjct: 302 VYRNGGLNPYDYYLPHWTPLK 322


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,280,532
Number of Sequences: 27780
Number of extensions: 344128
Number of successful extensions: 947
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)