Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0154
(642 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 23 1.6
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 23 1.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 3.7
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 3.7
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 21 8.6
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 8.6
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 21 8.6
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 23.4 bits (48), Expect = 1.6
Identities = 21/81 (25%), Positives = 36/81 (44%)
Frame = -1
Query: 246 HSCFISNPCTLRKYRPVSFFIYLLLLLRH*IDFKQFSNIFVFRYHSKGVCNISQLFNSLI 67
H F+S L Y S+F YL + ++ S IF + G + S++
Sbjct: 72 HFSFMSRFLCLPFY---SYFFYLSYIYT--TYSRKLSGIFKYIDQMAGYTGFLAMLTSMV 126
Query: 66 S*TKGFFYRSFDELKTILSHI 4
FY+ ++LKT+LS++
Sbjct: 127 -----MFYKRSNDLKTLLSNL 142
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 23.4 bits (48), Expect = 1.6
Identities = 21/81 (25%), Positives = 36/81 (44%)
Frame = -1
Query: 246 HSCFISNPCTLRKYRPVSFFIYLLLLLRH*IDFKQFSNIFVFRYHSKGVCNISQLFNSLI 67
H F+S L Y S+F YL + ++ S IF + G + S++
Sbjct: 28 HFSFMSRFLCLPFY---SYFFYLSYIYT--TYSRKLSGIFKYIDQMAGYTGFLAMLTSMV 82
Query: 66 S*TKGFFYRSFDELKTILSHI 4
FY+ ++LKT+LS++
Sbjct: 83 -----MFYKRSNDLKTLLSNL 98
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 565 RHPPIFCSLYLRKLKQRLVECRFKYYYYV 479
RH PI L K+K+ L + R+ Y +V
Sbjct: 274 RHSPIPFIKKLGKIKENLEQSRYFIYMFV 302
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 565 RHPPIFCSLYLRKLKQRLVECRFKYYYYV 479
RH PI L K+K+ L + R+ Y +V
Sbjct: 274 RHSPIPFIKKLGKIKENLEQSRYFIYMFV 302
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 565 RHPPIFCSLYLRKLKQRLVECRFKYYYYV 479
RH PI L K+K+ L + R+ Y +V
Sbjct: 274 RHSPIPFIKKLGKIKENLEQSRYFIYMFV 302
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 565 RHPPIFCSLYLRKLKQRLVECRFKYYYYV 479
RH PI L K+K+ L + R+ Y +V
Sbjct: 274 RHSPIPFIKKLGKIKENLEQSRYFIYMFV 302
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 225 PCTLRKYRPVSFFIYLLLLL 166
PC R Y P +FI LL ++
Sbjct: 317 PCP-RNYNPADYFIQLLAIV 335
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 225 PCTLRKYRPVSFFIYLLLLL 166
PC R Y P +FI LL ++
Sbjct: 317 PCP-RNYNPADYFIQLLAIV 335
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 21.0 bits (42), Expect = 8.6
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 291 VINDT*MLLYIVNTVSDCSESTRKYRQLKNTRKYLK 398
+IND L YI+ + + + K +KYLK
Sbjct: 163 IINDMCSLYYILQITLIVNYALALKNRFKELQKYLK 198
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 74 VLFLEPKDFFTVHLM 30
+LFL D+FT+HL+
Sbjct: 193 LLFLLCLDYFTLHLL 207
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 488 LLRKILCSEKIVIE*FLRLL 429
+L++I EK+V+E FL L
Sbjct: 13 MLQRIKMEEKLVVEKFLNSL 32
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,926
Number of Sequences: 336
Number of extensions: 2641
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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