Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0154
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2785|AAX52968.1|  512|Drosophila melanogaster CG33518-P...    30   2.3  
AY070849-1|AAL48471.1|  665|Drosophila melanogaster GM02933p pro...    29   7.1  
AE014297-2|AAN13329.1|  665|Drosophila melanogaster CG12581-PB, ...    29   7.1  
AE014297-1|AAF52174.2|  665|Drosophila melanogaster CG12581-PA, ...    29   7.1  

>AE014297-2785|AAX52968.1|  512|Drosophila melanogaster CG33518-PA
           protein.
          Length = 512

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 562 HPPIFCSLYLRKLKQRLVECRFKYYYYVKSCAV 464
           HPP  C +     K+   ECR K  YY ++CAV
Sbjct: 264 HPPPACHVVADSCKEDR-ECRLKLEYYEQACAV 295


>AY070849-1|AAL48471.1|  665|Drosophila melanogaster GM02933p
           protein.
          Length = 665

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 640 EPVF*LKISLTSPFRRFPSYSYTPLRHPPIFCSLYLRKLKQRLVEC 503
           EP F   + L SPF R P       +HPPIF ++  R    +++EC
Sbjct: 101 EPKF---LPLDSPFARMPR-----AQHPPIFAAILRRTTGIKVLEC 138


>AE014297-2|AAN13329.1|  665|Drosophila melanogaster CG12581-PB,
           isoform B protein.
          Length = 665

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 640 EPVF*LKISLTSPFRRFPSYSYTPLRHPPIFCSLYLRKLKQRLVEC 503
           EP F   + L SPF R P       +HPPIF ++  R    +++EC
Sbjct: 101 EPKF---LPLDSPFARMPR-----AQHPPIFAAILRRTTGIKVLEC 138


>AE014297-1|AAF52174.2|  665|Drosophila melanogaster CG12581-PA,
           isoform A protein.
          Length = 665

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 640 EPVF*LKISLTSPFRRFPSYSYTPLRHPPIFCSLYLRKLKQRLVEC 503
           EP F   + L SPF R P       +HPPIF ++  R    +++EC
Sbjct: 101 EPKF---LPLDSPFARMPR-----AQHPPIFAAILRRTTGIKVLEC 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,193,456
Number of Sequences: 53049
Number of extensions: 413411
Number of successful extensions: 592
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)