Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0148
(684 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0631 - 12397517-12398452,12398693-12398819,12398971-123991... 52 4e-07
04_04_1357 + 32860677-32860781,32861484-32861588,32861678-328617... 48 5e-06
08_02_0098 - 12324664-12324822,12325430-12325543,12325649-123259... 48 9e-06
01_06_1149 - 34901338-34901466,34901707-34901838,34901940-349022... 46 4e-05
01_01_0994 - 7861310-7862119,7862378-7862498,7862718-7862901,786... 44 1e-04
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317... 43 2e-04
08_02_1102 + 24319569-24319917,24320120-24321496,24321819-243220... 42 3e-04
09_06_0108 - 20912236-20912364,20912470-20912601,20912718-209130... 42 6e-04
03_02_0382 - 7958634-7959272,7959358-7959583,7959725-7959810,795... 41 0.001
06_03_1177 + 28174909-28175016,28176386-28176484,28177188-281772... 39 0.003
07_01_0062 - 457230-457339,457689-457962,458100-458195,459041-45... 38 0.006
07_03_0036 + 12694304-12694408,12694551-12694652,12694867-126949... 36 0.040
03_01_0130 - 1007433-1007712,1007739-1007803,1007804-1008001,100... 36 0.040
04_04_1636 + 34951841-34954322,34954440-34954627,34955737-349558... 35 0.052
02_05_0566 - 30017031-30017309,30018077-30018172,30018261-300183... 35 0.052
07_01_0061 - 451093-451377,451501-451596,451714-451824 33 0.16
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550... 32 0.49
01_01_0186 + 1598046-1598234,1599215-1599277,1599359-1599448,159... 32 0.49
06_02_0041 + 10889741-10890092,10890161-10890235,10891139-108923... 31 0.64
09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534... 30 1.5
07_03_0498 + 18786732-18786869,18788048-18788143,18788301-18788588 30 1.5
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 30 1.5
09_02_0072 + 3895868-3895999,3897814-3897909,3898484-3898771 30 2.0
07_03_0394 - 17633753-17636788 30 2.0
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 30 2.0
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 29 2.6
07_01_1046 - 9138000-9138293,9139550-9139714,9139862-9140010,914... 29 2.6
05_05_0149 - 22733703-22736216 29 2.6
09_06_0140 + 21090686-21091645,21092142-21092221,21092705-210929... 29 3.4
07_03_0505 + 18858406-18858522,18859860-18859955,18860760-18861047 29 4.5
03_02_0599 - 9730204-9730314,9730766-9731549,9731631-9732051,973... 29 4.5
03_02_0731 - 10786122-10787018,10787859-10788449,10788659-107887... 28 6.0
02_01_0753 - 5586705-5586766,5587864-5588056,5588154-5588423,558... 28 6.0
11_01_0542 - 4280457-4280984,4281533-4281828,4281918-4282083 28 7.9
>02_02_0631 -
12397517-12398452,12398693-12398819,12398971-12399154,
12399303-12399395,12400029-12400077,12400565-12400624,
12400689-12400730,12400840-12400992,12401075-12401206,
12401313-12401408,12401936-12402079,12402234-12402308,
12403896-12404021
Length = 738
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 258 DPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
DPNGL+DP+V +L +R+ T + TLNP W E F +P++ + L L+V D D
Sbjct: 321 DPNGLADPYVKGHL---GPYRFQTKIHKKTLNPKWMEEFKIPVTSWAALNLLSLQVRDKD 377
Query: 438 P 440
P
Sbjct: 378 P 378
>04_04_1357 +
32860677-32860781,32861484-32861588,32861678-32861728,
32861829-32861949,32862495-32862616,32863032-32863133,
32863226-32863300,32863391-32863470,32863601-32863751,
32863850-32864080,32864221-32864517,32864638-32864751,
32864857-32865030
Length = 575
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = +3
Query: 258 DPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
D NG SDP+V + L S +Y T V S +LNPVW + F + ++ D L LEV+D D
Sbjct: 457 DMNGKSDPYVVLSL-KKSKTKYKTRVVSESLNPVWNQTFDFVVEDGLH-DMLMLEVYDHD 514
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSL 413
+++ ++KD G SDPF +Y+ + + LNP+W EHF + + ++
Sbjct: 270 QARDLTNKDLIGKSDPFAIVYVRPLPDKMKRSKTINNDLNPIWNEHFEFIVE-DADTQTV 328
Query: 414 CLEVWDFD 437
++++D D
Sbjct: 329 TVKIYDDD 336
>08_02_0098 -
12324664-12324822,12325430-12325543,12325649-12325921,
12326124-12326354,12326444-12326594,12326680-12326759,
12326839-12326913,12326992-12327093,12328000-12328121,
12329726-12329791,12330158-12330201,12330850-12330898,
12330967-12331087,12334631-12334735
Length = 563
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +3
Query: 258 DPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
D G +DPFV +YL + + T V + TLNP+W + F + ++ D L +EVWD D
Sbjct: 450 DVMGKADPFVVLYLKKGETKK-KTRVVTETLNPIWNQTFDFVVEDALH-DLLMVEVWDHD 507
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 249 SSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVW 428
++KD G SDPF +Y+ + + LNP+W EH+ + T + L ++++
Sbjct: 276 TNKDLVGKSDPFAVLYIRPLQDKMKKSKTINNDLNPIWNEHYEFVVEDT-STQRLTVKIY 334
Query: 429 D 431
D
Sbjct: 335 D 335
>01_06_1149 -
34901338-34901466,34901707-34901838,34901940-34902290,
34902301-34902619,34902756-34902784,34903641-34903715,
34903799-34903900,34904002-34904120,34904752-34904875,
34904976-34905026,34905143-34905241,34905751-34905861
Length = 546
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSL 413
R+Q KD G SDP+V + + + T+VK G LNP W E F ++ ++ L
Sbjct: 252 RAQNLQKKDLLGKSDPYVKLTMSDDKLPSKKTTVKRGNLNPEWNEDFKFVVTDPETQE-L 310
Query: 414 CLEVWDFDPA 443
++V+D++ A
Sbjct: 311 EIKVFDWEQA 320
>01_01_0994 -
7861310-7862119,7862378-7862498,7862718-7862901,
7862975-7863070,7863428-7863476,7863555-7863596,
7863684-7863836,7865631-7865705,7866462-7866587
Length = 551
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +3
Query: 258 DPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
D NGLSDP+V L ++ T ++ TL+P W E F +P++ + + L +EV D D
Sbjct: 178 DMNGLSDPYVKGRL---GPFKFQTQIQKKTLSPKWFEEFKIPITSWESLNELAMEVCDKD 234
>02_03_0065 -
14629676-14629804,14631119-14631247,14631383-14631736,
14631817-14632063,14632155-14632231,14632574-14632648,
14632721-14632822,14632966-14633084,14633538-14633627,
14634866-14635022,14635085-14635098,14635425-14635548,
14635628-14635678,14635793-14635891,14636962-14637072
Length = 625
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSL 413
R+ + + KD G SDP+V + L TSVK LNP W E F L + ++ +L
Sbjct: 355 RAVKLTKKDFLGKSDPYVKLKLTEEKLPSKKTSVKRSNLNPEWNEDFKLVVKDPESQ-AL 413
Query: 414 CLEVWDFD 437
L V+D++
Sbjct: 414 ELTVYDWE 421
>08_02_1102 +
24319569-24319917,24320120-24321496,24321819-24322001,
24322147-24322460,24322515-24322631,24323057-24323313,
24323504-24323684,24323802-24324074,24324535-24324729
Length = 1081
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = +3
Query: 237 SQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLC 416
++ + D NG SDP+V + L R+ T V LNP W++ FS + G V D L
Sbjct: 10 ARNLRAMDSNGFSDPYVKLQL---GKQRFKTKVVKKNLNPAWDQEFSFSV-GDV-RDVLK 64
Query: 417 LEVWDFD 437
L V+D D
Sbjct: 65 LYVYDED 71
>09_06_0108 -
20912236-20912364,20912470-20912601,20912718-20913071,
20913161-20913407,20913489-20913565,20913971-20914045,
20914118-20914219,20914329-20914447,20914861-20914984,
20915081-20915131,20915247-20915345,20915839-20915949
Length = 539
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSL 413
R+Q KD G SDP+V + + + T+VK LNP W E F ++ + ++
Sbjct: 268 RAQNLRKKDLLGKSDPYVKLKMSDDKLPSKKTTVKRSNLNPEWNEDFKFVVT---DPETQ 324
Query: 414 CLEVWDFDPAETVK-EKM 464
LE+ FD + K EKM
Sbjct: 325 ALEINVFDWEQVGKHEKM 342
>03_02_0382 -
7958634-7959272,7959358-7959583,7959725-7959810,
7959909-7959989,7960102-7960200,7960348-7960466,
7960557-7960677,7960831-7960881,7961041-7961142,
7962610-7962717,7962877-7962962,7963353-7963449
Length = 604
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSL 413
R++ +K+ G SDP+V +Y+ + TSV LNP W E FSL ++ L
Sbjct: 333 RAESLKNKELIGKSDPYVVLYI--RPMFKEKTSVIDDNLNPEWNETFSL-IAEDKETQHL 389
Query: 414 CLEVWDFD 437
L+V+D D
Sbjct: 390 ILQVFDED 397
>06_03_1177 +
28174909-28175016,28176386-28176484,28177188-28177238,
28177394-28177517,28177765-28177883,28177954-28178055,
28178124-28178198,28178390-28178466,28178920-28179169,
28179311-28179664,28179807-28179941,28180097-28180225
Length = 540
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF 374
R+ D G SDP+V + L TS+K LNP W EHF
Sbjct: 268 RAMNLLKMDLLGKSDPYVKLRLSGEKLPSKKTSIKMSNLNPEWNEHF 314
>07_01_0062 -
457230-457339,457689-457962,458100-458195,459041-459151
Length = 196
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/86 (30%), Positives = 40/86 (46%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSL 413
R S+D G SDP+V ++L + + T V T NPVW E +L + E +
Sbjct: 14 RGVNLVSRDAGG-SDPYVVLHL---DNQKLKTGVVKKTTNPVWNEELTLAVRNP--ETPI 67
Query: 414 CLEVWDFDPAETVKEKMTKIFDVKGV 491
LEV+D D + FD++ +
Sbjct: 68 QLEVFDKDTFSKDDQMGDAEFDIEAL 93
>07_03_0036 +
12694304-12694408,12694551-12694652,12694867-12694947,
12696475-12696525,12697308-12697473,12698759-12698877,
12698975-12699073,12699684-12699764,12699845-12699927,
12701177-12701402,12704272-12704439,12706408-12706800
Length = 557
Score = 35.5 bits (78), Expect = 0.040
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSL 413
++ +K+ G SDP+V +Y+ + T V LNP W E F L + + S+
Sbjct: 312 KATSLKNKELIGKSDPYVILYV--RPMFKVKTKVIDDNLNPEWNETFPLIVEDKETQ-SV 368
Query: 414 CLEVWDFDPAETVKE 458
EV+D D + K+
Sbjct: 369 IFEVYDEDRLQQDKK 383
>03_01_0130 -
1007433-1007712,1007739-1007803,1007804-1008001,
1008103-1008273,1008405-1008553,1008780-1008927,
1009015-1009083,1009168-1009416,1009516-1009710,
1009869-1009985,1010205-1011329
Length = 921
Score = 35.5 bits (78), Expect = 0.040
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMS 389
SDP+VT+ L S + R T V + NPVW +HF +P++
Sbjct: 141 SDPYVTVQLASATVAR--TYVVNDDENPVWAQHFLIPVA 177
>04_04_1636 +
34951841-34954322,34954440-34954627,34955737-34955838,
34956101-34956177,34956258-34956319,34956504-34956511
Length = 972
Score = 35.1 bits (77), Expect = 0.052
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 318 RYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
R+ T++K LNPVW E F +S N L LE + ++
Sbjct: 37 RFRTAIKDKDLNPVWNERFYFNVSDPSNLPELALEAYVYN 76
>02_05_0566 -
30017031-30017309,30018077-30018172,30018261-30018377,
30018538-30018667,30018866-30019029,30019480-30019485
Length = 263
Score = 35.1 bits (77), Expect = 0.052
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
SDP+V + L + T+VK LNPVW E L +S N L LEV+D D
Sbjct: 128 SDPYVVLTL---GEQKAQTTVKPSDLNPVWNE--VLKISIPRNYGPLKLEVYDHD 177
>07_01_0061 - 451093-451377,451501-451596,451714-451824
Length = 163
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTV 398
R + +D G SDP+V + L + TSVK ++NP+W E +L + +
Sbjct: 14 RGINLAYRDTRG-SDPYVVLRL---GKQKVKTSVKKKSVNPIWHEELTLSIMNPI 64
>02_01_0739 +
5505630-5505654,5505965-5506049,5506444-5506519,
5506694-5506857,5506878-5506935,5507283-5507399,
5507543-5507638,5507905-5508186
Length = 300
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
SDP+V + L + TSV LNPVW E L +S L L+V+D D
Sbjct: 164 SDPYVVLTL---GQQKAQTSVIKANLNPVWNE--ELKLSVPQQYGPLKLQVFDHD 213
>01_01_0186 +
1598046-1598234,1599215-1599277,1599359-1599448,
1599968-1600093,1600583-1600726,1600845-1601255,
1601283-1601364,1601403-1601491,1602250-1602471,
1602552-1602827,1603116-1603253,1603772-1604077,
1604203-1604421
Length = 784
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 258 DPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSG 392
D G SDP+V ++ S + T V TL+P W + F P +G
Sbjct: 589 DLRGTSDPYVRVHY---GSKKKRTKVVYKTLSPDWNQTFEFPETG 630
>06_02_0041 +
10889741-10890092,10890161-10890235,10891139-10892341,
10892970-10893253,10893343-10893459,10894126-10894388,
10894557-10894725,10894838-10895110,10895674-10895718,
10896472-10896591,10896926-10896987,10897296-10897318,
10897911-10898128
Length = 1067
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 267 GLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
GLSDP+ + L R T V TL+P W+E F+ + +D L + V D D
Sbjct: 21 GLSDPYAKLQL---GRQRGKTRVAKRTLSPTWDEEFAFRVVDL--KDELVVVVVDED 72
>09_04_0741 -
19852339-19852497,19853185-19853246,19853352-19853415,
19853561-19853614,19853744-19853890,19854460-19854564,
19854651-19854794,19854987-19855093,19855613-19855712,
19855804-19855833,19856492-19856608,19856705-19856828,
19857143-19857189,19857272-19857400,19857777-19857852,
19858446-19858543,19858630-19858671,19858811-19859044
Length = 612
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +3
Query: 264 NGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFDPA 443
NG SDP+ I R+++ V G+ NP+W E F+ + + ++ + WD
Sbjct: 107 NGTSDPYALI--TCGEEKRFSSMVP-GSRNPMWGEEFNFFVDSLPVKINVTIYDWDIVWK 163
Query: 444 ETVKEKMTKIFDVKGVKG 497
TV + + +G G
Sbjct: 164 STVLGSVIVPVESEGQSG 181
>07_03_0498 + 18786732-18786869,18788048-18788143,18788301-18788588
Length = 173
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
SDP+V ++S + TSV+ NPVW E L ++ + LEV+D D
Sbjct: 35 SDPYV---VLSYGPQKVKTSVQKKNSNPVWNEVLQLAVTNPTK--PVKLEVFDED 84
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFDPAET 449
SDP+V + L S T V +LNPVW E L + + L L+V+D D T
Sbjct: 245 SDPYVILNLGHQSM---KTKVIKSSLNPVWNERILLSIPDPI--PMLKLQVYDKDTFTT 298
>09_02_0072 + 3895868-3895999,3897814-3897909,3898484-3898771
Length = 171
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
SDP+V + L + + T V + LNPVW E S + + EV+D+D
Sbjct: 33 SDPYVVVRLAAMNK---KTKVINSCLNPVWNEEMSFSIEEPAG--VIKFEVFDWD 82
>07_03_0394 - 17633753-17636788
Length = 1011
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 267 GLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMS--GTVNEDSLCLEVWDFDP 440
G +P+V I ++ T++K +NPVW E F +S + E L V+ +
Sbjct: 23 GTCNPYVEIEF---DDQKFRTAIKERDINPVWNEQFYFNISDPSRLTEKDLEAYVYHANR 79
Query: 441 AETVKEKMTKI 473
A K + K+
Sbjct: 80 ASNSKTCLGKV 90
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
SDP+V + L + T V LNPVW E L +S L L+V+D D
Sbjct: 986 SDPYVVLTL---GQQKAKTKVIKSNLNPVWNE--VLTLSVPQKYGPLKLQVYDHD 1035
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 264 NGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPM 386
N SDP+VTI + + R T V NPVW ++F +P+
Sbjct: 283 NMTSDPYVTIQVSYATVAR--TYVVPNNENPVWTQNFLVPV 321
>07_01_1046 -
9138000-9138293,9139550-9139714,9139862-9140010,
9140363-9140510,9140659-9140727,9140827-9141087,
9141498-9141692,9142932-9143048,9143701-9144477
Length = 724
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVN 401
SDP+V++ L + + T V + + NP W+EHF + ++ +V+
Sbjct: 67 SDPYVSVCLSGATVAQ--TRVIANSENPKWDEHFYVQVAHSVS 107
>05_05_0149 - 22733703-22736216
Length = 837
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 408 NLHSQCQTWVKKNVLPKQDLEFPTSPMC 325
+L++ Q W++KNVL K +LE S +C
Sbjct: 680 DLNTDLQVWIEKNVLLKGELENRFSSLC 707
>09_06_0140 +
21090686-21091645,21092142-21092221,21092705-21092906,
21093052-21093327,21093414-21093482,21093638-21093785,
21094080-21094228,21094897-21095061,21095623-21095732,
21095868-21095946,21095947-21096240
Length = 843
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMS 389
SDP+VT+ + R T V +PVW+E F++P++
Sbjct: 78 SDPYVTLSVAGAVVAR--TRVIPNDQDPVWDERFAVPLA 114
>07_03_0505 + 18858406-18858522,18859860-18859955,18860760-18861047
Length = 166
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFD 437
SDP+V ++ + S + +S++ ++NP W E +L ++ + + +EV+D D
Sbjct: 28 SDPYV---VLRHGSQKVKSSIRYHSINPEWNEELTLSITNMML--PVKIEVFDKD 77
>03_02_0599 -
9730204-9730314,9730766-9731549,9731631-9732051,
9732139-9732385,9733730-9733921,9734071-9734204,
9734316-9734477,9736162-9736200,9737507-9737825
Length = 802
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 216 AECRGGRSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSL-PMSG 392
A R G+ + ++ D G ++ I NSS Y +S + ++NP ++H +L P S
Sbjct: 352 ANKRSGKKHKENNDDSMG---KYLEIGAPRNSSMEYQSSPREMSVNPTEKQHETLMPQSK 408
Query: 393 TVNE 404
T E
Sbjct: 409 TTRE 412
>03_02_0731 -
10786122-10787018,10787859-10788449,10788659-10788740,
10789914-10790107
Length = 587
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 282 FVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTV 398
F + LM N + +V + + V+E HF +PM+G V
Sbjct: 78 FFLLMLMGNGNLPNPVAVIAPNIPAVYEAHFGVPMAGAV 116
>02_01_0753 -
5586705-5586766,5587864-5588056,5588154-5588423,
5588522-5588687,5589049-5589209,5590065-5590181,
5590269-5590549,5590750-5590833,5591100-5592542,
5593167-5593575
Length = 1061
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 267 GLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNE 404
G SDP+V + + R T+V L+P+W+E F + E
Sbjct: 40 GHSDPYVRLQM---GRRRAKTTVVKRCLSPLWDEEFGFAVGDAEEE 82
>11_01_0542 - 4280457-4280984,4281533-4281828,4281918-4282083
Length = 329
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 652 PDDAAYSSAQTEPHGHTAGWNGLEWYIRCSNQFVV 548
P + A+++P G GW G++W + FV+
Sbjct: 261 PGGGDHDYAESQPSGGCGGWPGVDWAAVGDDGFVI 295
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,808,094
Number of Sequences: 37544
Number of extensions: 385941
Number of successful extensions: 1043
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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