Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0148
(684 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36) 48 5e-06
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 48 9e-06
SB_27807| Best HMM Match : C2 (HMM E-Value=0) 46 3e-05
SB_45184| Best HMM Match : C2 (HMM E-Value=1.1e-22) 42 4e-04
SB_43325| Best HMM Match : C2 (HMM E-Value=1.1e-22) 42 4e-04
SB_20559| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 42 4e-04
SB_41604| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_40174| Best HMM Match : Copine (HMM E-Value=5.5e-20) 40 0.001
SB_40281| Best HMM Match : C2 (HMM E-Value=6.7e-39) 40 0.002
SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_50691| Best HMM Match : C2 (HMM E-Value=2.8e-17) 38 0.008
SB_4929| Best HMM Match : C2 (HMM E-Value=2.4e-33) 38 0.008
SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13) 37 0.013
SB_3985| Best HMM Match : C2 (HMM E-Value=0) 36 0.023
SB_2344| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_3618| Best HMM Match : C2 (HMM E-Value=4.8e-23) 34 0.093
SB_794| Best HMM Match : C2 (HMM E-Value=1e-23) 34 0.093
SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31) 34 0.12
SB_1629| Best HMM Match : C2 (HMM E-Value=7.3e-17) 34 0.12
SB_34190| Best HMM Match : MAM (HMM E-Value=0) 33 0.16
SB_29967| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_16478| Best HMM Match : C2 (HMM E-Value=2.2e-13) 31 0.66
SB_58025| Best HMM Match : C2 (HMM E-Value=0.0016) 31 0.87
SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_21545| Best HMM Match : FerB (HMM E-Value=3.1e-30) 31 1.1
SB_17935| Best HMM Match : C2 (HMM E-Value=6.1e-07) 31 1.1
SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44) 30 1.5
SB_59658| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_57429| Best HMM Match : zf-UBR1 (HMM E-Value=8.7) 29 2.7
SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_2516| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_30502| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 29 4.6
SB_18049| Best HMM Match : C2 (HMM E-Value=3.2) 28 8.1
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36)
Length = 454
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +3
Query: 258 DPNGLSDPFVTIYLMSN--SSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWD 431
DPNGLSDP+V + L+ + ++ + T + +L+PV+ E F + + L +EVWD
Sbjct: 127 DPNGLSDPYVKVKLLPDPDNTSKKKTKIFKESLSPVFNETFEFKIQNKDKDRRLSIEVWD 186
Query: 432 FD 437
+D
Sbjct: 187 WD 188
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/68 (38%), Positives = 37/68 (54%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSL 413
R + + D G SDPFVT + ++ + V TLNPVW E S+ +S ++D L
Sbjct: 615 RGRNLVAMDITGKSDPFVTFRV--GDQEKFRSRVHQKTLNPVWME--SVALSLPADDDKL 670
Query: 414 CLEVWDFD 437
L+VWD D
Sbjct: 671 YLDVWDKD 678
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/79 (32%), Positives = 37/79 (46%)
Frame = +3
Query: 207 GVDAECRGGRSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPM 386
GV C G + D NGLSDP+ +Y +N + T V TL+PVW P+
Sbjct: 474 GVLLVCMHG-GESMIPMDKNGLSDPYCVVY--ANRNLVKKTEVAKETLDPVWNAMVEFPV 530
Query: 387 SGTVNEDSLCLEVWDFDPA 443
+ + +L V+D D A
Sbjct: 531 A-NFTQVTLSFAVFDKDDA 548
>SB_27807| Best HMM Match : C2 (HMM E-Value=0)
Length = 405
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 264 NGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFS---LPMSGTVNEDSLCLEVWDF 434
+G SDPFV I L+ + H+ T VK LNPVW E F+ P + + + +L ++V D+
Sbjct: 157 SGTSDPFVKIMLLPDKKHKLETRVKRKNLNPVWNEVFTFEGFPHNKLMGK-TLYMQVLDY 215
Query: 435 D 437
D
Sbjct: 216 D 216
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEEH--FSLPMSGTVN 401
++ + + D G SDP+V +Y+M + T++K T +PVW E F +P+ +
Sbjct: 279 KANKLKAMDLTGSSDPYVKMYIMHKDRRLDKKKTTIKRRTRDPVWNESFIFDVPLD-KIR 337
Query: 402 EDSLCLEVWDFD 437
+ + V D+D
Sbjct: 338 DLTFVFNVMDYD 349
>SB_45184| Best HMM Match : C2 (HMM E-Value=1.1e-22)
Length = 344
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 252 SKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWD 431
S DP+G+SDP+ + S S + T V TLNP W + + + +D LC+ V+D
Sbjct: 281 SSDPSGMSDPYCEV---SMGSQEHKTRVCPQTLNPKWNSTMTFTVK-DMEQDVLCITVFD 336
Query: 432 FD 437
D
Sbjct: 337 RD 338
>SB_43325| Best HMM Match : C2 (HMM E-Value=1.1e-22)
Length = 87
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 252 SKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWD 431
S DP+G+SDP+ + S S + T V TLNP W + + + +D LC+ V+D
Sbjct: 24 SSDPSGMSDPYCEV---SMGSQEHKTRVCPQTLNPKWNSTMTFTVK-DMEQDVLCITVFD 79
Query: 432 FD 437
D
Sbjct: 80 RD 81
>SB_20559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 252 SKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWD 431
S DP+G+SDP+ + S S + T V TLNP W + + + +D LC+ V+D
Sbjct: 237 SSDPSGMSDPYCEV---SMGSQEHKTRVCPQTLNPKWNSTMTFTVK-DMEQDVLCITVFD 292
Query: 432 FD 437
D
Sbjct: 293 RD 294
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 252 SKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWD 431
S DP+G+SDP+ + S S + T V TLNP W + + + +D LC+ V+D
Sbjct: 946 SSDPSGMSDPYCEV---SMGSQEHKTRVCPQTLNPKWNSTMTFTVK-DMEQDVLCITVFD 1001
Query: 432 FD 437
D
Sbjct: 1002 RD 1003
>SB_41604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 252 SKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWD 431
S DP+G+SDP+ + S S + T V TLNP W + + + +D LC+ V+D
Sbjct: 281 SSDPSGMSDPYCEV---SMGSQEHKTRVCPQTLNPKWNSTMTFTVK-DMEQDVLCITVFD 336
Query: 432 FD 437
D
Sbjct: 337 RD 338
>SB_40174| Best HMM Match : Copine (HMM E-Value=5.5e-20)
Length = 723
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHR---YNTSVKSGTLNPVWEEHFSLPMSGTVNE 404
R + KD G SDPF+ Y + + + T V TLNP W+ FS+P N
Sbjct: 77 RGHKLDKKDFFGKSDPFLVFYRCNEDNSFTAVHRTEVVKNTLNPTWKP-FSVPARALCNG 135
Query: 405 D---SLCLEVWDFD 437
D S+ +E +D+D
Sbjct: 136 DIDRSIRIECYDWD 149
>SB_40281| Best HMM Match : C2 (HMM E-Value=6.7e-39)
Length = 230
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 237 SQRFSSKDPNGLSDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEEHFSLP--MSGTVNE 404
++ +KD NG SDPFV YL+ + + T LNP W F+ + +
Sbjct: 102 ARNLPAKDANGFSDPFVKAYLLPDKGRKSKRKTPTIRKNLNPQWNFPFTYDDVTLEELMD 161
Query: 405 DSLCLEVWDFD 437
SL L VWD+D
Sbjct: 162 RSLELTVWDWD 172
>SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 210 VDAECRGGRSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMS 389
+D E + G+ +++D G SDP+V ++ Y + S LNP W E F +P+
Sbjct: 133 LDIELKEGKD--LAARDKTGTSDPYVKF--KADGRQIYKSRTISKNLNPQWNEKFCVPIE 188
Query: 390 GTVNEDSLCLEVWDFD 437
+ L+V+DFD
Sbjct: 189 DIT--VPMVLKVFDFD 202
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 258 DPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPM 386
D +G SDP+ L + +Y + TLNP W E F L M
Sbjct: 290 DDSGFSDPYCRFRL---GNEKYKSKACKETLNPQWSEQFDLKM 329
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSL 413
R+ +S D G SDPF I + ++ R T+ TLNP W + + +P+ D L
Sbjct: 476 RAVGLASADLGGASDPFAVIEV---NNQRLVTNTIYKTLNPNWNKIYEMPVWDI--HDVL 530
Query: 414 CLEVWDFD 437
+ V+D D
Sbjct: 531 DITVFDED 538
>SB_50691| Best HMM Match : C2 (HMM E-Value=2.8e-17)
Length = 430
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 252 SKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWD 431
S D +G SDP+ I SN TSV GT+NPVW+ + + +N+ +L V+D
Sbjct: 304 SMDADGYSDPYCII--TSNREKVKTTSVVEGTVNPVWDSITEI-LVKDINKTNLHFFVYD 360
Query: 432 FD 437
D
Sbjct: 361 RD 362
>SB_4929| Best HMM Match : C2 (HMM E-Value=2.4e-33)
Length = 567
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +3
Query: 237 SQRFSSKDPNGLSDPFVTIYLM--SNSSHRYNTSVKSGTLNPVWEEH--FSLPMSGTVNE 404
++ KD +G+SDPF I L+ R+ T++ TLNP W+ + + + +
Sbjct: 437 AKNLPGKDADGMSDPFCKITLLPDKKGKTRHKTAIIKRTLNPSWDYNLIYEELSQEELRQ 496
Query: 405 DSLCLEVWDFDPA 443
L + +WD D A
Sbjct: 497 RVLEISIWDHDIA 509
>SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13)
Length = 752
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSL 413
++ +SK+ G P+ I N R TS+ T NP W E+F+L ++ E L
Sbjct: 3 KAMGLTSKEHGGNISPYCIIST-GNPHQRKRTSLLKDTHNPFWNEYFALDINSKTRE--L 59
Query: 414 CLEVWDFD 437
++++D++
Sbjct: 60 TIDIYDYE 67
>SB_3985| Best HMM Match : C2 (HMM E-Value=0)
Length = 835
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 267 GLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFDPA 443
G SDP+ + + + ++ T VK LNP W E F + + +D + + +WD D A
Sbjct: 386 GKSDPYAILEI---GAQKFRTKVKKNDLNPTWNETFEAFVDNSEGQD-IDMFLWDEDKA 440
>SB_2344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 34.3 bits (75), Expect = 0.093
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Frame = +3
Query: 258 DPNGLSDPFVTIYLM--SNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNED----SLCL 419
D G SDP+V ++L+ ++ S++ + K TLNPV+ E +L G E+ +L L
Sbjct: 32 DHGGTSDPYVKLHLLPGASKSNKLRSHTKYKTLNPVFNE--TLTYYGITEEEISSKTLRL 89
Query: 420 EVWDFD 437
+V+D D
Sbjct: 90 QVFDED 95
>SB_3618| Best HMM Match : C2 (HMM E-Value=4.8e-23)
Length = 486
Score = 34.3 bits (75), Expect = 0.093
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = +3
Query: 234 RSQRFSSKD-PNGLSDPFVTIYLMSN--SSHRYNTSVKSGTLNPVWE--EHFSLPMS-GT 395
+ + S +D P+G +DP+V + + + +S +++ GTLNP W E + +S
Sbjct: 33 QGRNLSPRDLPSGTADPYVLVAIQPDWGNSGTLKSTIIQGTLNPTWPFGEIYRFNLSPEQ 92
Query: 396 VNEDSLCLEVWDFDP 440
+ E L + ++D DP
Sbjct: 93 LKETKLSVHLYDNDP 107
>SB_794| Best HMM Match : C2 (HMM E-Value=1e-23)
Length = 583
Score = 34.3 bits (75), Expect = 0.093
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 258 DPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSG 392
DPNG SDP+ + + T+V+ T+NP W E ++G
Sbjct: 65 DPNGKSDPYCIVAV---GDQEQRTAVQYNTINPEWRETLQFEVAG 106
>SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31)
Length = 778
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 225 RGGRSQRFSSKDPNGLSDPFVTIY-LMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVN 401
R RS+ D LS P Y ++ + +Y T K +PVW+E F + T
Sbjct: 280 RSHRSEGSYCADMALLSKPTSDPYCIVEVGAQKYRTKTKKSNCDPVWKETFEAFIDNTEG 339
Query: 402 EDSLCLEVWDFDPA 443
++ C +V+D D A
Sbjct: 340 QELFC-KVYDEDIA 352
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 234 RSQRFSSKDPNGLSDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEE 368
R++R S+ P ++PFV +YL+ + + R T G+L P + E
Sbjct: 641 RAERLRSRYPENKTNPFVRLYLLPDRTKKTRRRTGAVRGSLAPSFNE 687
>SB_1629| Best HMM Match : C2 (HMM E-Value=7.3e-17)
Length = 327
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEV 425
S P+V IY + + H + T++ + LNP + E F + + L L++
Sbjct: 174 SSPYVRIYALPSRRHNHRTNIVTNNLNPTFNELFIISGLTLMEVQQLALQI 224
>SB_34190| Best HMM Match : MAM (HMM E-Value=0)
Length = 384
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -2
Query: 254 GTKSLASTTSTFSINSGGSLASALVRSCVCLSLPILNASCTYDSIACCPTSQPTSHPP 81
G S A T S+ + +LASA VR C C P A CT+D C ++ T P
Sbjct: 134 GALSAAGVVVTRSVTA--TLASADVRRCFCRYAPPHTADCTFDENWCHWSNDNTGSSP 189
>SB_29967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 267 GLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF--SLPMSGTVNEDSLCLEVWDFD 437
G SDP+V + + + T V LNPVW E F L ++SL ++V D++
Sbjct: 19 GKSDPYVVVGFLGSKK---KTEVIKDELNPVWNEKFEWDLQKRALSPDESLHIQVKDWE 74
>SB_16478| Best HMM Match : C2 (HMM E-Value=2.2e-13)
Length = 186
Score = 31.5 bits (68), Expect = 0.66
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Frame = +3
Query: 246 FSSKDPNGLSDPFVTIY---LMSNSSHRYN----TSVKSGTLNPVWEEHFSLPMSGTVNE 404
F ++D L++ + +Y ++ NSS R T+VK+ TLNPV+ E + + E
Sbjct: 34 FKARDLKPLTEGYPAVYAEVVLVNSSRRIRKRKATTVKNSTLNPVYNEAMAFDAANMKLE 93
Query: 405 DSLCLEVWDFDPAETVKEKM 464
D + L+++ E V +K+
Sbjct: 94 D-VKLQIFVKQKLEGVPDKI 112
>SB_58025| Best HMM Match : C2 (HMM E-Value=0.0016)
Length = 103
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 285 VTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPM-SGTVNEDSLCLEVWDFD 437
V Y+ + + T V G+ NPV+ EHF M + SL EV+ D
Sbjct: 6 VLYYVQNKLVDKKKTKVAKGSTNPVFNEHFVFEMKEEELKNSSLLCEVYQSD 57
>SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2179
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3
Query: 258 DPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMS---GTVN-EDSLCLEV 425
D G SDP+V + S T V LNPVW+E S GT++ +D+L + V
Sbjct: 16 DFRGESDPYVKL---SFRGEEKKTKVIDDNLNPVWDEDNEFEWSLGGGTLSLDDTLKVSV 72
Query: 426 WDFD 437
D+D
Sbjct: 73 KDWD 76
>SB_21545| Best HMM Match : FerB (HMM E-Value=3.1e-30)
Length = 1142
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +3
Query: 252 SKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF---SLPMSGTV-----NED 407
+ DP+G+SDP+ + + SS T + TL P W++ + + G++ N
Sbjct: 358 ASDPDGVSDPYARVVFGTRSS---VTETLARTLCPTWDQTLIFDEVNIYGSIEQVAENPP 414
Query: 408 SLCLEVWDFDPAE 446
++ +E++D DP +
Sbjct: 415 AVIIELYDKDPVD 427
>SB_17935| Best HMM Match : C2 (HMM E-Value=6.1e-07)
Length = 129
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEEHF 374
+DPFV + LM + + TSV GTL PV+ E F
Sbjct: 23 TDPFVKVSLMVSGRQIKKTKTSVMHGTLRPVYNEAF 58
>SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44)
Length = 915
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 249 SSKDPNGLSDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEEH--FSLPMSGTVNEDSLC 416
SS++ + DP+V +YL+ + S + T + + NP + E +S + + L
Sbjct: 814 SSRNSSTAGDPYVKLYLLPDPSKTTKLKTKIAKKSQNPTYNETLVYSNLSAADLKTRHLQ 873
Query: 417 LEVWDFD 437
+ VWD D
Sbjct: 874 VTVWDHD 880
>SB_59658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 530 ASTGKHDNELIGTSNIPLKSIPAGGMAMWFSL 625
A+ ++ ++ +G IP+KS+P G+ WF L
Sbjct: 12 ATDNENIDDFLGYLEIPVKSVPVDGIDQWFIL 43
>SB_57429| Best HMM Match : zf-UBR1 (HMM E-Value=8.7)
Length = 122
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +1
Query: 130 YVQEAFKIGNDKHTQLLTKAEAKEPPELMLNVEVVEAKDLVPKT 261
YV E ++ G H +L + PE++ E + +++PK+
Sbjct: 63 YVDEKYQFGCQSHCAILARTWTCTGPEMIPGPETIPGPEMIPKS 106
>SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 276 DPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLP-MSGTVNEDSLCLEVWDFD 437
+PF + L + H+ + V+ T NP ++E F + + SLC+ + FD
Sbjct: 408 NPFAIVQLQPDYQHQLQSYVQRKTTNPNFDETFEFEVLVQELQRLSLCITLHSFD 462
>SB_2516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -2
Query: 236 STTSTFS-INSGGSLASALVRSCVCLSLPILNASCTYDSIACCPTSQP--TSHPPI 78
STTS F I++ + SAL CV S+ +S YD I C + QP TS P I
Sbjct: 110 STTSKFQPISTRNVVPSAL--PCVQPSITSSQSSTRYDVILACSSGQPCVTSSPSI 163
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 255 KDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVW 362
+DP GL+DP+V + L K TLNP++
Sbjct: 1736 QDPGGLADPYVVVQLGKKKLDN-KDQYKPNTLNPIF 1770
>SB_30502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 273 SDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEEHFSLPMSG-TVNEDSLCLEV 425
+DP++ + L + + NT VK TLNP++ E F+ ++ ++ ++ L V
Sbjct: 144 TDPYIKLSLYCDGVRLSKANTRVKRRTLNPIYNEKFNFNVTADQISHTTVALRV 197
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 260 VFGTKSLASTTSTFSINSGGSLASALVRSC 171
V+G+KS++ T FS SG + + RSC
Sbjct: 1690 VYGSKSVSGNTVNFSCQSGYQIVGSSSRSC 1719
>SB_18049| Best HMM Match : C2 (HMM E-Value=3.2)
Length = 52
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 285 VTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPM 386
V Y+ + + T V G+ NPV+ EHF M
Sbjct: 6 VLYYVQNKLVDKKKTKVAKGSTNPVFNEHFVFEM 39
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 148 KIGNDKHTQLLTKAEAKEPPELMLNVEVVEAK 243
K + KHT+ L+ AKE EL N++ +EAK
Sbjct: 1119 KANSQKHTETLSSQRAKE-KELHTNIKELEAK 1149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,505,411
Number of Sequences: 59808
Number of extensions: 442599
Number of successful extensions: 1219
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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