Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0140
         (754 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ...    63   6e-09
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    48   2e-04
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    42   0.012
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    42   0.022
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    38   0.27 
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   1.1  
UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma j...    36   1.4  
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   3.3  
UniRef50_O60079 Cluster: Probable ubiquitin carboxyl-terminal hy...    33   5.7  
UniRef50_Q04004 Cluster: Phosducin-like protein 1; n=2; Saccharo...    33   5.7  
UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_A2D9Z7 Cluster: Putative uncharacterized protein; n=1; ...    33   10.0 
UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:...    33   10.0 

>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
           scapularis|Rep: Putative secreted protein - Ixodes
           scapularis (Black-legged tick) (Deer tick)
          Length = 65

 Score = 63.3 bits (147), Expect = 6e-09
 Identities = 30/53 (56%), Positives = 35/53 (66%)
 Frame = +3

Query: 33  PY*GDTANGSIYQFWFLRSYSVTWITVVILELIHAIRTLTSDGMSAFIRSKPI 191
           P  G+TANGS+ Q WFLRS+  TWITV ILELIHA+         AFIR + I
Sbjct: 2   PKQGETANGSLNQLWFLRSFLPTWITVAILELIHAVSPKPLGATGAFIRPRSI 54


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = -1

Query: 412 LLPSLDVVAVSQAPSPESNPDSP 344
           LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 42.3 bits (95), Expect = 0.012
 Identities = 27/61 (44%), Positives = 31/61 (50%)
 Frame = -3

Query: 602 LTATILVYXXXXXXXXXXXTRLALQLFLVKILKCTHSDYEAS*ESRIVIFRHYLPCREWV 423
           LTATIL+Y           TRLALQL   K+L   HS+Y+      IVI  HYL   E  
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIWPYIVISCHYLSYLELA 373

Query: 422 I 420
           I
Sbjct: 374 I 374



 Score = 39.1 bits (87), Expect = 0.12
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = -1

Query: 391 VAVSQAPSPESNPDSPLPVTTMVVAETTIES 299
           +A+SQAPSPESN +SPLPV  M+     I+S
Sbjct: 372 LAISQAPSPESNSNSPLPVKAMLGQYPNIKS 402


>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 41.5 bits (93), Expect = 0.022
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +2

Query: 98  YLDNCGNSRANTCNQNSDQ*WDECFY*IKTN 190
           YLDNCGNSRANTC +      D C Y  KTN
Sbjct: 468 YLDNCGNSRANTCRRAPTS-GDACIYQTKTN 497


>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = -2

Query: 507 KVYSFRLRGLVRVPYRYFSSLPPVPGVG 424
           KV SF+L+GL RV Y YFSSLPP  G G
Sbjct: 76  KVDSFQLQGLERVLYCYFSSLPPRVGSG 103



 Score = 34.3 bits (75), Expect = 3.3
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = -3

Query: 632 ARRTNATTSFLTATILVYXXXXXXXXXXXTRLALQLFLVKILK 504
           AR  + TTSFLTA  L+Y           TRLALQ  LVK  K
Sbjct: 34  ARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFK 76


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +2

Query: 284 MSALSTFDGSFCDYHG 331
           MSALSTFDG+FC YHG
Sbjct: 1   MSALSTFDGTFCAYHG 16


>UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC07011 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 101

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +2

Query: 101 LDNCGNSRANTCNQNSDQ*WDECFY*IKTNRRRASRPKSLILMNLDNFCRSLVKYR 268
           +DNC NSRANTC ++  +     F   +TNR +       +  ++D  C +++  R
Sbjct: 1   MDNCSNSRANTCLESLTRKGTGAFIRTETNRVQRLMTSVPVTSSVDELCDNVILSR 56


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -2

Query: 570 SWNYRGCWHQTCP 532
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_O60079 Cluster: Probable ubiquitin carboxyl-terminal
           hydrolase 12; n=1; Schizosaccharomyces pombe|Rep:
           Probable ubiquitin carboxyl-terminal hydrolase 12 -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 979

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +1

Query: 205 ASEVVNFDESG*LLQIAGQVPATHLSNVCLINFRW*F---LRLPWLSRVTGNQGSIPERE 375
           + E+++F E    L   G   +  L   C+IN  W     LRL +L +   NQ S  E++
Sbjct: 243 SKEIIDFLEKSKTLVELGMDSSCSLVAECMINETWPVDRALRLQFLIQQRNNQSSNEEQK 302

Query: 376 PEKRLP 393
            EKR+P
Sbjct: 303 QEKRVP 308


>UniRef50_Q04004 Cluster: Phosducin-like protein 1; n=2;
           Saccharomyces cerevisiae|Rep: Phosducin-like protein 1 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 230

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = -2

Query: 621 KCNYELFNRNNFSIRYWSWNYRGCWHQTCPPIVPR*NIKVYSFRL---RGLVRVPYRYFS 451
           KC Y      N + RY +  +     QTCP +V + NIKV  F +    GL +V Y  FS
Sbjct: 114 KCQYMNEKLENLAKRYLTTRFIKVNVQTCPFLVNKLNIKVLPFVVGYKNGLEKVRYVGFS 173

Query: 450 SLPPVPGVGNLR 415
            L   P   ++R
Sbjct: 174 KLGNDPNGFDIR 185


>UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1;
           Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
           protein - Roseovarius sp. HTCC2601
          Length = 507

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 90  YSVTWITVVILELIHAIRTLTSDGMSAFIRSKPIDGGPRV 209
           YS T + VV+ EL+    T+ SD  +A I + P+DG  R+
Sbjct: 139 YSATSMAVVLSELVVDDETIPSDNAAAQISAGPVDGETRI 178


>UniRef50_A2D9Z7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 872

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 409 LPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES**GRHLKD 275
           +PSL  V++SQ   P+  P +PLP    +++E   E   G  + D
Sbjct: 67  IPSLPPVSISQTIKPQIIPQNPLPTMNHIISEPLDEPASGEEMAD 111


>UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:
            Mucin-16 - Homo sapiens (Human)
          Length = 22152

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
 Frame = -1

Query: 475  KSPVSLFFVTT---SRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVA 317
            ++P  + ++TT       SG F+ + PS+   +   + SPES P SPLPVT ++ +
Sbjct: 5614 RTPGDVSWMTTPPVEETSSG-FSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,964,258
Number of Sequences: 1657284
Number of extensions: 14735730
Number of successful extensions: 35521
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 34102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35508
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)