Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0134
(788 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_50137| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_32453| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_35396| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) 28 9.9
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -3
Query: 123 SWIVARRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
SWI RRT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 4 SWIYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -3
Query: 108 RRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
RRT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -3
Query: 108 RRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
RRT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -3
Query: 108 RRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
RRT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -3
Query: 108 RRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
RRT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 11 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 45
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 58.4 bits (135), Expect = 6e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -3
Query: 105 RTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
RT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 29 RTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 62
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 48.0 bits (109), Expect = 9e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3
Query: 105 RTSAKAFAKGVFINQERKLEVRRRLDT 25
RT+AKAFAK VFINQERKLE RRR DT
Sbjct: 2 RTTAKAFAKNVFINQERKLEDRRRSDT 28
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/36 (66%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Frame = -3
Query: 108 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
R+T+ ++ AK VFINQERKLE RRR DT LVLT+N
Sbjct: 8 RKTNYCESIAKNVFINQERKLEDRRRSDTVLVLTIN 43
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 130 VKFLDRRKTNISESICQRCFHQSRTKV 50
VKFLD RKTN ESI + F K+
Sbjct: 2 VKFLDLRKTNYCESIAKNVFINQERKL 28
>SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 670 DVVAVSQAPSPESNPDSPLPVTTM 741
DVVAVSQAPSPESNP+SP PV TM
Sbjct: 105 DVVAVSQAPSPESNPNSPSPVVTM 128
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = -3
Query: 108 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
R+T+ ++ + VFINQERKLE RRR DT LVLT+N
Sbjct: 8 RKTNYCESICQDVFINQERKLEDRRRSDTVLVLTIN 43
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 130 VKFLDRRKTNISESICQRCFHQSRTKV 50
VKFLD RKTN ESICQ F K+
Sbjct: 2 VKFLDLRKTNYCESICQDVFINQERKL 28
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = -3
Query: 108 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
R+T+ ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 127 KFLDRRKTNISESICQRCFHQSRTKV 50
+ L RKTN ESICQ CF K+
Sbjct: 3 EILGFRKTNYCESICQECFINQERKL 28
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = -3
Query: 108 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
R+T+ ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -2
Query: 130 VKFLDRRKTNISESICQRCFHQSRTKV 50
VKFLD RKTN ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = -3
Query: 108 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVLTVN 4
R+T+ ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -2
Query: 130 VKFLDRRKTNISESICQRCFHQSRTKV 50
VKFLD RKTN ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
>SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +1
Query: 679 AVSQAPSPESNPDSPLPVTTM 741
AVSQAPSPESNP+SP PV TM
Sbjct: 52 AVSQAPSPESNPNSPSPVVTM 72
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 35.1 bits (77), Expect = 0.065
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 680 PFLRLPLRNRTLIPRYP 730
PFLRLPLRNRTLI R+P
Sbjct: 224 PFLRLPLRNRTLILRHP 240
>SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3
Query: 516 SSRVIPAPIAYTKIVAVKKL 457
++ VIPAPIAY K+VAVKKL
Sbjct: 34 AAAVIPAPIAYIKVVAVKKL 53
>SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3
Query: 516 SSRVIPAPIAYTKIVAVKKL 457
++ VIPAPIAY K+VAVKKL
Sbjct: 79 AAAVIPAPIAYIKVVAVKKL 98
>SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3
Query: 516 SSRVIPAPIAYTKIVAVKKL 457
++ VIPAPIAY K+VAVKKL
Sbjct: 71 AAAVIPAPIAYIKVVAVKKL 90
>SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3
Query: 516 SSRVIPAPIAYTKIVAVKKL 457
++ VIPAPIAY K+VAVKKL
Sbjct: 24 AAAVIPAPIAYIKVVAVKKL 43
>SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3
Query: 516 SSRVIPAPIAYTKIVAVKKL 457
++ VIPAPIAY K+VAVKKL
Sbjct: 11 AAAVIPAPIAYIKVVAVKKL 30
>SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3
Query: 507 VIPAPIAYTKIVAVKKL 457
VIPAPIAY K+VAVKKL
Sbjct: 10 VIPAPIAYIKVVAVKKL 26
>SB_50137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = +1
Query: 313 TLTEEHRDRILILNRRFLERRLTDDMLRKRVSITADACTDSAAHKCNYELFNRNNFSIRY 492
++ +E R + N F + +L+ + R R A AC H EL + + RY
Sbjct: 119 SVKQEQAFRYALANYPFSKSKLS--VTRSRTIRLARACFPLREH----ELSVKQEQAFRY 172
Query: 493 WSWNYPAAGTRLALQLFLVKIFKVYSFRL 579
NYP + ++L++ ++ + +V +FRL
Sbjct: 173 ALANYPFSKSKLSVTKSMLSVTRVRTFRL 201
>SB_32453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +2
Query: 530 PSN--CSSLKYLKCTHSDYEAS*ESRIVIFRHYL-PVPGVGNLRA 655
PSN CS L YL+C +R+++F H L +G RA
Sbjct: 523 PSNLRCSILSYLRCNKPPVTIRWRTRLIVFTHLLVSYRSIGGQRA 567
>SB_35396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 191 QNSEVMINRDNWGHSY-CDVRGEILGSSQDEHQRKHLP 81
Q EV +++ GH Y C GE++ S++D H+ +P
Sbjct: 7 QCKEVESSKEILGHPYVCAFAGEVIQSTEDVHKPSWIP 44
>SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0)
Length = 441
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 661 PSLDVVAVSQAPSPESNPDSPLP 729
P+ DV+A Q P P S D PLP
Sbjct: 75 PAEDVMAAHQEPKPTSAIDQPLP 97
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,191,279
Number of Sequences: 59808
Number of extensions: 519684
Number of successful extensions: 1483
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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