Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0129
(598 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 2.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 4.0
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 4.0
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 5.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.2
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 9.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 9.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 9.2
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 9.2
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 9.2
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 9.2
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 9.2
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 9.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.2
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 2.3
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -3
Query: 563 RKAGERGSGSSPKRKTIFGVSY*IYTVFEXALY*NTNSLKRTLRTNIDQTRHRPHPLPV 387
R +R S +RK I +S + + Y N N+ + L NI+ P P+PV
Sbjct: 66 RSRDKRERERSKERKIISSLSN--NYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPV 122
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 467 Y*NTNSLKRTLRTNIDQTRHRPHPLPV 387
Y N N+ + L NI+ P P+PV
Sbjct: 334 YNNNNNYNKKLYYNINYIEQIPVPVPV 360
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 86 PDLSAASSGHFGLPRRTLVFK 24
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -3
Query: 155 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 72
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 132 RIPWNSNAQAEKKTLPGPLG 73
+IPW+ N +A K G G
Sbjct: 334 QIPWDKNVEALAKWANGQTG 353
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 494 IYTVFEXALY*NTNSLKRTLRTNIDQTRHRPHPLPV 387
I ++ ++ N N+ K+ NI+ P P+PV
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPV 117
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 494 IYTVFEXALY*NTNSLKRTLRTNIDQTRHRPHPLPV 387
I ++ ++ N N+ K+ NI+ P P+PV
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPV 117
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 494 IYTVFEXALY*NTNSLKRTLRTNIDQTRHRPHPLPV 387
I ++ ++ N N+ K+ NI+ P P+PV
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPV 117
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 461 NTNSLKRTLRTNIDQTRHRPHPLPV 387
N N+ + L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 461 NTNSLKRTLRTNIDQTRHRPHPLPV 387
N N+ + L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 461 NTNSLKRTLRTNIDQTRHRPHPLPV 387
N N+ + L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 461 NTNSLKRTLRTNIDQTRHRPHPLPV 387
N N+ + L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = -1
Query: 499 IKYIQFLXPHYIKILTR*NEHYARTSTRPGTGR 401
++Y+ YI + + HY R +T P R
Sbjct: 226 VRYVSQWEEVYIPLYQQPERHYERRATPPQPDR 258
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 494 IYTVFEXALY*NTNSLKRTLRTNIDQTRHRPHPLPV 387
I ++ ++ N N+ K+ NI+ P P+PV
Sbjct: 315 ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPV 350
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 41 DGVTQSGLKTPPRGPG 88
DG L +PPR PG
Sbjct: 128 DGPPSVSLSSPPREPG 143
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 404 PHPLPVQTRHAPVLRANPYSEV 339
P PLP A + + +PYS +
Sbjct: 652 PFPLPPNLASANISQLDPYSSL 673
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,266
Number of Sequences: 438
Number of extensions: 4030
Number of successful extensions: 26
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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