Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0127
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   3.3  
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           23   5.7  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           23   5.7  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           23   5.7  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           23   5.7  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 293 SCTRPSGRWCELPSAGLCL 349
           SC RP G  C  P  G C+
Sbjct: 594 SCDRPGGLLCSGPDHGRCV 612


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 242 AIVIRSVREEPQFRTFGSCTRPSGRWCELPSAGLCLNAS 358
           A+++RS +EEP  RT     +P+    + P  G C   S
Sbjct: 134 AVLVRSCKEEPSKRTGKYWIKPTEH--DEPFLGYCEQTS 170


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 242 AIVIRSVREEPQFRTFGSCTRPSGRWCELPSAGLCLNAS 358
           A+++RS +EEP  RT     +P+    + P  G C   S
Sbjct: 134 AVLVRSCKEEPSKRTGKYWIKPTEH--DEPFLGYCEQTS 170


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 242 AIVIRSVREEPQFRTFGSCTRPSGRWCELPSAGLCLNAS 358
           A+++RS +EEP  RT     +P+    + P  G C   S
Sbjct: 134 AVLVRSCKEEPSKRTGKYWIKPTEH--DEPFLGYCEQTS 170


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 242 AIVIRSVREEPQFRTFGSCTRPSGRWCELPSAGLCLNAS 358
           A+++RS +EEP  RT     +P+    + P  G C   S
Sbjct: 134 AVLVRSCKEEPSKRTGKYWIKPTEH--DEPFLGYCEQTS 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,866
Number of Sequences: 2352
Number of extensions: 11920
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)