Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0120
(645 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 28 0.057
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 23 2.2
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 22 5.0
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 22 5.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 6.6
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 28.3 bits (60), Expect = 0.057
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 621 RNNFSIRYWSWNYRGCWHQTC 559
R+NF + WNY CW C
Sbjct: 746 RHNFKGLHLDWNYPVCWQSNC 766
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/25 (32%), Positives = 9/25 (36%)
Frame = -1
Query: 633 ELFNRNNFSIRYWSWNYRGCWHQTC 559
+ NNF W Y CW C
Sbjct: 1930 DFIETNNFDGLDLDWEYPKCWQVDC 1954
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 1/20 (5%)
Frame = -1
Query: 642 WNYELFNRNNFSIRYWS-WN 586
W Y +F RYW+ WN
Sbjct: 101 WLYGIFGHETSCTRYWTCWN 120
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 417 TSKEGSRRANYPLPAREVVTINNDTGL 497
T + A+YP P E+V ND +
Sbjct: 250 TPARNPKEADYPSPLYELVDRRNDENI 276
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 21.8 bits (44), Expect = 5.0
Identities = 5/16 (31%), Positives = 9/16 (56%)
Frame = -1
Query: 612 FSIRYWSWNYRGCWHQ 565
+++ YW Y WH+
Sbjct: 117 YAVYYWRQQYEDFWHR 132
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 11 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 121
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 11 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 121
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 11 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 121
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 11 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 121
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 11 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 121
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 310 HLKDASPVLDHAICKSYPDH 251
+L D+SP L+ A C+ + H
Sbjct: 63 NLCDSSPCLNGATCQDHTTH 82
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,037
Number of Sequences: 336
Number of extensions: 3028
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -