Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0116
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 45 7e-05
SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 43 3e-04
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 37 0.013
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_30216| Best HMM Match : TIL (HMM E-Value=3.1) 32 0.38
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_1848| Best HMM Match : Galactosyl_T (HMM E-Value=1.4e-26) 29 3.5
SB_54195| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_36629| Best HMM Match : Fer2 (HMM E-Value=0.0041) 29 4.7
SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2) 28 6.2
SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_23657| Best HMM Match : Sushi (HMM E-Value=0) 28 8.1
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 550 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRXC-TTHLPKQPALKMD 687
+ +RS D KGVG S QQDGGHGS NP + C TTHLPKQ ALKMD
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPAKECVTTHLPKQLALKMD 56
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 550 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRXC-TTHLPKQPALKMD 687
+ +RS D KGVG S QQDGGHGS NPL+ C TT LPKQ ALKMD
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPLKECVTTPLPKQLALKMD 56
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -1
Query: 243 NRYGPPSGFPLTST*PGIVHHLSGPSICA 157
NRY PP FPL S GIVHHLSGP+ CA
Sbjct: 1 NRYEPPPEFPLASPYSGIVHHLSGPNRCA 29
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/64 (45%), Positives = 35/64 (54%)
Frame = -3
Query: 610 PAVMSDQRLSWCPMSVF*AP*TTFGSSHSASSAYKIGPLGTVIRSPASSFE*AGVLTHLK 431
P V SD+R W P F GSS ASS Y+ GP T I P + + G+LT+LK
Sbjct: 62 PFVGSDERRLWHPYRAF-------GSSRIASSGYQNGPTRTRIHCPGFNKQ-VGLLTNLK 113
Query: 430 FENR 419
FENR
Sbjct: 114 FENR 117
>SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/29 (68%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 604 QQDGGHGSRNPLRXC-TTHLPKQPALKMD 687
QQDGGHG + C TTHLPKQ ALKMD
Sbjct: 2 QQDGGHGKLESAKECVTTHLPKQLALKMD 30
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1
Query: 550 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLR 642
+ +RS D KGVG S QQDGGHGS NPLR
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPLR 40
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3
Query: 244 ESLRSSIRVSPDFDLTRHSSPSFGSQHLCS 155
ESLR+S RVS F L RHSSPSFGSQ + S
Sbjct: 35 ESLRASTRVSSGFTLFRHSSPSFGSQQMRS 64
>SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2
Query: 563 NAHGTP*KALVAHDSRTVAMEVGIR 637
+AH TP K LVA DSRTVAMEVGIR
Sbjct: 9 DAHQTPQKVLVALDSRTVAMEVGIR 33
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGFIVRVSRSSHPFKV 429
+PTPF+ S ER L LN + + Q WPT + H +SGF SR+S+ FKV
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGFNY-ASRTSYQFKV 57
>SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 599 ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
E+PTPF+ S ER L LN + + LQ WPT + H +SGF
Sbjct: 58 EQPTPFVGSDERRLWHLNRAFGSSRIASSALQKWPTRNSHSLSGF 102
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -3
Query: 541 FGSSHSASSAYKIGPLGTVIRSPAS 467
FGSS ASSAY+ GPLGT I PAS
Sbjct: 21 FGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 620 WPPSCCH--ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
W P + E+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 71 WLPQASYPCEQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 124
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 602 HERPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+E+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 122 YEQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 167
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 599 ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
E+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 41 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 85
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 599 ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
E+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 38 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 82
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 599 ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
E+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 39 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 83
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 599 ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
E+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 39 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTSNSHSLSGF 83
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN+ + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNHAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 34.3 bits (75), Expect = 0.094
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAYGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTKNSHSLSGF 45
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q WPT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 243 NRYGPPSGFPLTST*PGIVHH 181
NRY PP FPL S GIVHH
Sbjct: 1 NRYEPPPEFPLASPYSGIVHH 21
>SB_30216| Best HMM Match : TIL (HMM E-Value=3.1)
Length = 212
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 603 TAGRWPWKSESAK 641
TAGRWPWK ESAK
Sbjct: 1 TAGRWPWKLESAK 13
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 17 TTHLPKQLALKMD 29
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 603 TAGRWPWKSESAK 641
TAGRWPWK ESAK
Sbjct: 1 TAGRWPWKLESAK 13
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 17 TTHLPKQLALKMD 29
>SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 603 TAGRWPWKSESAK 641
TAGRWPWK ESAK
Sbjct: 80 TAGRWPWKLESAK 92
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 96 TTHLPKQLALKMD 108
>SB_1848| Best HMM Match : Galactosyl_T (HMM E-Value=1.4e-26)
Length = 308
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 163 NAGTRKMVNYAWSGRSQGKP*WRTVAILTCNRSSE 267
NA RK + + W P WRTV ++ N + E
Sbjct: 75 NAARRKEIRFTWGTDFLPSPRWRTVFLIGANDNQE 109
>SB_54195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 163 NAGTRKMVNYAWSGRSQGKP*WRTVAILTCNRSSE 267
NA RK + + W P WRTV ++ N + E
Sbjct: 79 NAARRKEIRFTWGTDFLPTPRWRTVFLIGANDNQE 113
>SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 596 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLQNWPTWHRHQISGF 468
+PTPF+ S ER L LN + + Q PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKGPTRNSHSLSGF 45
>SB_36629| Best HMM Match : Fer2 (HMM E-Value=0.0041)
Length = 128
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +3
Query: 111 LPRRLVSNQ*MKARSEHKC----WDPKDGELCLVRSKSGETLMEDRSDSDV 251
L RR VSN + +++H+ + +DG+ V++K G++L++ D+DV
Sbjct: 29 LARRYVSNGKEQTKAKHETVSITFVDRDGDRQTVKAKVGDSLLDVAKDNDV 79
>SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 17 TTHLPKQLALKMD 29
>SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 11 TTHLPKQLALKMD 23
>SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 649 TTHLPKQPALKMD 687
TTHLPKQ ALKMD
Sbjct: 17 TTHLPKQLALKMD 29
>SB_23657| Best HMM Match : Sushi (HMM E-Value=0)
Length = 331
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 144 KARSEHKCWDPKDGELCLVRSKSGETLMEDRSDSDVQSIVGTGYRGERLIEPSSSWFRPK 323
K + + +CW PK V SKSG+ + +Q GT G + + P
Sbjct: 210 KPKCKRRCWVPKPPLRGQVLSKSGKDYAKHGEHLRIQCNSGTDAVGPSQSQCKDGRWSPN 269
Query: 324 FP 329
FP
Sbjct: 270 FP 271
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,724,809
Number of Sequences: 59808
Number of extensions: 475321
Number of successful extensions: 1116
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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