BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVf0115 (593 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373... 31 0.92 01_05_0706 + 24457148-24458031,24458621-24458822,24458896-244590... 30 1.6 07_03_0846 - 21983581-21986055 29 2.1 05_04_0017 + 17180991-17181074,17181657-17181759,17181794-17182014 28 6.5 11_07_0014 + 27379941-27379974,27381975-27382033,27382561-273827... 27 8.5 11_01_0015 - 115965-116076,116432-116757,116889-117024,117161-11... 27 8.5 10_06_0143 - 11183574-11183761,11183989-11184344,11184437-111845... 27 8.5 09_02_0267 - 6485428-6485895,6488255-6488303,6488466-6488469,648... 27 8.5 07_03_0626 + 20060013-20060273,20061017-20061274 27 8.5 05_07_0290 + 29016410-29018920 27 8.5 02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 27 8.5 01_07_0370 - 43119049-43120278,43121376-43121420,43121421-431216... 27 8.5 >06_03_1055 - 27234824-27234838,27236087-27236125,27236322-27237388, 27237422-27237630,27237650-27238053 Length = 577 Score = 30.7 bits (66), Expect = 0.92 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +3 Query: 321 ASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGS 455 A+ A +GK + E E S+QCD T + +S RE ++R+P+ + Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473 >01_05_0706 + 24457148-24458031,24458621-24458822,24458896-24459080, 24459170-24459503,24459614-24459818,24460022-24460128, 24460220-24460381 Length = 692 Score = 29.9 bits (64), Expect = 1.6 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = -2 Query: 388 CLEPPDSRGSTVSISLPDSARLASAL----EAFRHNPADGSSHHRPLGRCM 248 C E RG+ + +L RLA AL EA R +PA+G +H R G C+ Sbjct: 245 CPESAACRGNRAA-ALAGLGRLADALRDCEEAVRLDPANGRAHSRLAGLCL 294 >07_03_0846 - 21983581-21986055 Length = 824 Score = 29.5 bits (63), Expect = 2.1 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = -2 Query: 463 DLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASA 314 DL+D G +R +C+T S PD S VS+ LPD+A+ A A Sbjct: 326 DLQDFTGGCKRNVPLQCQTN--SSSAQTQPDKFYSMVSVRLPDNAQSAVA 373 >05_04_0017 + 17180991-17181074,17181657-17181759,17181794-17182014 Length = 135 Score = 27.9 bits (59), Expect = 6.5 Identities = 18/70 (25%), Positives = 34/70 (48%) Frame = +3 Query: 183 WLVVAIVILLSTRGTAVSDIWFMHRPSGRWCELPSAGLCLNASKAEASLAESGKDMLTVE 362 WL V ++ S + +A+ +W + + + P A + A A+L + + Sbjct: 64 WLEVVGRVVGSDKASAMESLWKVVG-AAKHGGGPVAAMARQLPSALATLGAATVPVGASG 122 Query: 363 PRESGGSKQC 392 PR+SGGS++C Sbjct: 123 PRDSGGSRRC 132 >11_07_0014 + 27379941-27379974,27381975-27382033,27382561-27382782, 27383727-27383810,27385054-27385131,27385716-27385832, 27385956-27386019,27386399-27386402,27386565-27386613, 27388973-27389440 Length = 392 Score = 27.5 bits (58), Expect = 8.5 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Frame = -2 Query: 553 LQTIPSPDIELSYIRLRSRDARVKKKTDSIDLRDPNGLRRRVSRFE-CETRLVKSHCLEP 377 LQ+ +P + + D KKK S + N R+RV+ FE +R + L Sbjct: 234 LQSTATPKAPKVKEQFQLGDGEPKKKPTSTPSQKRNNKRKRVTAFERLWSRAGELRILRA 293 Query: 376 PDSRGSTVSISLPDSARLASAL 311 S +T +LPD+ L + L Sbjct: 294 MASHTNTHRSTLPDTCDLFATL 315 >11_01_0015 - 115965-116076,116432-116757,116889-117024,117161-117344, 117455-117523,118091-118217,120028-120269,120343-120497, 120969-121040,121126-121194,121276-121347,121435-121567, 121661-122166,122255-122789,122943-123018 Length = 937 Score = 27.5 bits (58), Expect = 8.5 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Frame = +2 Query: 32 AFIATLLFDPSMSALPIIANKIRQALDCSPIKRERELG*TVVRQVSFTL-LMACRCDSNT 208 A +AT+ P P I+ +++ D I+ +REL ++ +S T A + Sbjct: 823 AEVATMCVKPKGVLRPSISEVLKEIQDAIAIELQRELPSSIHHLMSKTSPSEAVNTTGSV 882 Query: 209 AQYERNRSFGHLVHAPAER 265 E+N SF L+ P R Sbjct: 883 QDLEQNASFDELLMRPGLR 901 >10_06_0143 - 11183574-11183761,11183989-11184344,11184437-11184592, 11184825-11184994,11185906-11186064,11186856-11187164, 11187281-11187576,11187825-11188174,11188279-11188434, 11188634-11188803,11189289-11189447,11190702-11191010, 11191172-11191458,11191911-11192263,11192366-11192521, 11192680-11192849,11195800-11195958,11196937-11197254, 11197658-11197786 Length = 1449 Score = 27.5 bits (58), Expect = 8.5 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -2 Query: 127 FDG*TIQRLANFVRNDRKSRHRRIKKQ 47 FD T+++ NFVRN+R S + KQ Sbjct: 872 FDNYTVEQNINFVRNNRSSDINTVTKQ 898 >09_02_0267 - 6485428-6485895,6488255-6488303,6488466-6488469, 6488849-6488912,6489036-6489152,6489737-6489814, 6491058-6491141,6492086-6492307,6492835-6492893, 6494894-6494927 Length = 392 Score = 27.5 bits (58), Expect = 8.5 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Frame = -2 Query: 553 LQTIPSPDIELSYIRLRSRDARVKKKTDSIDLRDPNGLRRRVSRFE-CETRLVKSHCLEP 377 LQ+ +P + + D KKK S + N R+RV+ FE +R + L Sbjct: 234 LQSTATPKAPKVKEQFQLGDGEPKKKPTSTPSQKRNNKRKRVTAFERLWSRAGELRILRA 293 Query: 376 PDSRGSTVSISLPDSARLASAL 311 S +T +LPD+ L + L Sbjct: 294 MASHTNTHRSTLPDTCDLFATL 315 >07_03_0626 + 20060013-20060273,20061017-20061274 Length = 172 Score = 27.5 bits (58), Expect = 8.5 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -3 Query: 333 RLGWLRP*RRSGIIP 289 RLGWLRP R S ++P Sbjct: 32 RLGWLRPSRLSAVVP 46 >05_07_0290 + 29016410-29018920 Length = 836 Score = 27.5 bits (58), Expect = 8.5 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -1 Query: 275 APPAARPVHEPNVRNCGSSRT 213 APP+ARP H P + N + RT Sbjct: 17 APPSARPRHAPPLLNAAALRT 37 >02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-568298, 568420-568489 Length = 540 Score = 27.5 bits (58), Expect = 8.5 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 Query: 340 ARICSLWSPESREALNNVTLLVAFRIQNARRDVEA 444 AR C W PESR ++ V ++A ++R+ A Sbjct: 449 ARECLQWEPESRPTMSEVVQILATIAPSSRKHAAA 483 >01_07_0370 - 43119049-43120278,43121376-43121420,43121421-43121662, 43121908-43122686,43123123-43123463,43123565-43123785, 43123866-43124176,43124257-43124516,43124836-43124918, 43124940-43125036,43125132-43125305,43126215-43126592 Length = 1386 Score = 27.5 bits (58), Expect = 8.5 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%) Frame = -2 Query: 457 RDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGS 278 R P + S F+ E SH + S+ ++S S + AFR++ A+ + Sbjct: 622 RTPIRNYKEPSSFQIERDSSASHSFQ----ESSSPNMSKSPSLQKTHGFLAFRNSDANHN 677 Query: 277 SHHRP--LGRCMNQMSETAVPLVLS 209 SH P QM+ET +P V S Sbjct: 678 SHESPNIQSPPSEQMAETRLPTVAS 702 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,922,488 Number of Sequences: 37544 Number of extensions: 366695 Number of successful extensions: 1002 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 980 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1002 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1411925004 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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