Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0115
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81146-10|CAB54274.2|  796|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z81146-9|CAB03528.1|  817|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81121-2|CAB54308.2|  796|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81121-1|CAB03351.1|  817|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70308-14|CAB54254.2|  796|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z70308-13|CAA94353.1|  817|Caenorhabditis elegans Hypothetical p...    29   3.3  
AY090019-1|AAM09088.1|  796|Caenorhabditis elegans minibrain kin...    29   3.3  
AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical...    29   3.3  
Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical...    27   7.6  

>Z81146-10|CAB54274.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/76 (23%), Positives = 28/76 (36%)
 Frame = -2

Query: 466 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 287
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 286 DGSSHHRPLGRCMNQM 239
             S+HH P+    N +
Sbjct: 79  SSSNHHHPVYHSQNSL 94


>Z81146-9|CAB03528.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/76 (23%), Positives = 28/76 (36%)
 Frame = -2

Query: 466 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 287
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 286 DGSSHHRPLGRCMNQM 239
             S+HH P+    N +
Sbjct: 79  SSSNHHHPVYHSQNSL 94


>Z81121-2|CAB54308.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/76 (23%), Positives = 28/76 (36%)
 Frame = -2

Query: 466 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 287
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 286 DGSSHHRPLGRCMNQM 239
             S+HH P+    N +
Sbjct: 79  SSSNHHHPVYHSQNSL 94


>Z81121-1|CAB03351.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/76 (23%), Positives = 28/76 (36%)
 Frame = -2

Query: 466 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 287
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 286 DGSSHHRPLGRCMNQM 239
             S+HH P+    N +
Sbjct: 79  SSSNHHHPVYHSQNSL 94


>Z70308-14|CAB54254.2|  796|Caenorhabditis elegans Hypothetical
           protein F49E11.1c protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/76 (23%), Positives = 28/76 (36%)
 Frame = -2

Query: 466 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 287
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 286 DGSSHHRPLGRCMNQM 239
             S+HH P+    N +
Sbjct: 79  SSSNHHHPVYHSQNSL 94


>Z70308-13|CAA94353.1|  817|Caenorhabditis elegans Hypothetical
           protein F49E11.1b protein.
          Length = 817

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/76 (23%), Positives = 28/76 (36%)
 Frame = -2

Query: 466 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 287
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 286 DGSSHHRPLGRCMNQM 239
             S+HH P+    N +
Sbjct: 79  SSSNHHHPVYHSQNSL 94


>AY090019-1|AAM09088.1|  796|Caenorhabditis elegans minibrain kinase
           2 protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/76 (23%), Positives = 28/76 (36%)
 Frame = -2

Query: 466 IDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPA 287
           ID+       R V   + + R V   C              +P SA  A+A  +F    +
Sbjct: 19  IDVTQQGQRDRSVMSLDAQGRSVSHECPTSTTLVRQLYLPQIPQSASFAAAPTSFSGASS 78

Query: 286 DGSSHHRPLGRCMNQM 239
             S+HH P+    N +
Sbjct: 79  SSSNHHHPVYHSQNSL 94


>AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical
           protein W10G11.14 protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +3

Query: 246 FMHRPSGRWCELPSAGLCLNASKAEA 323
           F +RPSG WC    AG   NA KA+A
Sbjct: 46  FFNRPSGGWCMRVFAG--FNAKKADA 69


>Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical
           protein F35E2.5 protein.
          Length = 575

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 17/85 (20%), Positives = 36/85 (42%)
 Frame = -2

Query: 475 TDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRH 296
           T S+ L       R  ++      + +++  +PP +   + + +LP +   +S+ E+   
Sbjct: 369 TTSLALETTTTATRTTAKITAVATVARTNTTQPPTTTPLSSTTALPTTLTSSSSTESTDG 428

Query: 295 NPADGSSHHRPLGRCMNQMSETAVP 221
           +    S+H   L     Q+  TA P
Sbjct: 429 SSTQTSTHPSQLSVKATQLVSTAEP 453


>AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical
           protein W10G11.15 protein.
          Length = 211

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +3

Query: 246 FMHRPSGRWCELPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 419
           F +RPSG WC     G     + AE S    G  +  ++ R      Q    ++++ S
Sbjct: 46  FFNRPSGGWCMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARS 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,720,064
Number of Sequences: 27780
Number of extensions: 286438
Number of successful extensions: 759
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)