Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0114
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 136 2e-32
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 136 2e-32
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 136 2e-32
Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2 prot... 124 4e-29
U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catal... 124 4e-29
AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical... 124 4e-29
AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical ... 124 4e-29
U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical p... 33 0.16
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 32 0.36
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 32 0.36
Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 2.6
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 2.6
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 2.6
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 28 4.5
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 28 4.5
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 5.9
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 27 7.8
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 136 bits (328), Expect = 2e-32
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +1
Query: 262 AKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIR 441
A +F +GK+TP+ +RFSTVGGESGSADT RDPRGFA+KFYT++G WDLVGNNTPIFFIR
Sbjct: 93 ADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIR 152
Query: 442 DPTLFPSFIHTQKRTLQ 492
DP FP+FIHTQKR Q
Sbjct: 153 DPIHFPNFIHTQKRNPQ 169
Score = 114 bits (274), Expect = 5e-26
Identities = 54/83 (65%), Positives = 65/83 (78%)
Frame = +2
Query: 5 DQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIP 184
+QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDRERIP
Sbjct: 8 NQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIP 66
Query: 185 ERVVHAKGAGAFGYFEVTHDITK 253
ERVVHAKGAGA GYFEVTHDI+K
Sbjct: 67 ERVVHAKGAGAHGYFEVTHDISK 89
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 449 HYSRVLSILRREPCNTSERSDMFWDFLTLRPETIHQLLYMLETVD-S*WYRHM 604
H+ + +R P + +M +DF RPE +HQ++++ YRHM
Sbjct: 156 HFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHM 208
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 136 bits (328), Expect = 2e-32
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +1
Query: 262 AKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIR 441
A +F +GK+TP+ +RFSTVGGESGSADT RDPRGFA+KFYT++G WDLVGNNTPIFFIR
Sbjct: 93 ADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIR 152
Query: 442 DPTLFPSFIHTQKRTLQ 492
DP FP+FIHTQKR Q
Sbjct: 153 DPIHFPNFIHTQKRNPQ 169
Score = 114 bits (274), Expect = 5e-26
Identities = 54/83 (65%), Positives = 65/83 (78%)
Frame = +2
Query: 5 DQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIP 184
+QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDRERIP
Sbjct: 8 NQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIP 66
Query: 185 ERVVHAKGAGAFGYFEVTHDITK 253
ERVVHAKGAGA GYFEVTHDI+K
Sbjct: 67 ERVVHAKGAGAHGYFEVTHDISK 89
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 449 HYSRVLSILRREPCNTSERSDMFWDFLTLRPETIHQLLYMLETVD-S*WYRHM 604
H+ + +R P + +M +DF RPE +HQ++++ YRHM
Sbjct: 156 HFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHM 208
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 136 bits (328), Expect = 2e-32
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +1
Query: 262 AKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIR 441
A +F +GK+TP+ +RFSTVGGESGSADT RDPRGFA+KFYT++G WDLVGNNTPIFFIR
Sbjct: 93 ADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIR 152
Query: 442 DPTLFPSFIHTQKRTLQ 492
DP FP+FIHTQKR Q
Sbjct: 153 DPIHFPNFIHTQKRNPQ 169
Score = 114 bits (274), Expect = 5e-26
Identities = 54/83 (65%), Positives = 65/83 (78%)
Frame = +2
Query: 5 DQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIP 184
+QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDRERIP
Sbjct: 8 NQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIP 66
Query: 185 ERVVHAKGAGAFGYFEVTHDITK 253
ERVVHAKGAGA GYFEVTHDI+K
Sbjct: 67 ERVVHAKGAGAHGYFEVTHDISK 89
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 449 HYSRVLSILRREPCNTSERSDMFWDFLTLRPETIHQLLYMLETVD-S*WYRHM 604
H+ + +R P + +M +DF RPE +HQ++++ YRHM
Sbjct: 156 HFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHM 208
>Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2
protein.
Length = 497
Score = 124 bits (300), Expect = 4e-29
Identities = 55/77 (71%), Positives = 64/77 (83%)
Frame = +1
Query: 262 AKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIR 441
A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++KFYT++G WDLVGNNTPIFFIR
Sbjct: 93 ADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIR 152
Query: 442 DPTLFPSFIHTQKRTLQ 492
D FP+FIH KR Q
Sbjct: 153 DAIHFPNFIHALKRNPQ 169
Score = 119 bits (287), Expect = 1e-27
Identities = 75/192 (39%), Positives = 104/192 (54%), Gaps = 4/192 (2%)
Frame = +2
Query: 5 DQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIP 184
+QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDRERIP
Sbjct: 8 NQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIP 66
Query: 185 ERVVHAKGAGAFGYFEVTHDITKSVLPKYLSP*AKGHRLLLDSQQLVERVDXXXXXXXXX 364
ERVVHAKGAGA GYFEVTHDITK + K LL+ + +
Sbjct: 67 ERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAG--ESGSADTVRD 124
Query: 365 XXXXSSILMMECGI*LEII---LP-FSL*EIQHYSRVLSILRREPCNTSERSDMFWDFLT 532
S E G +++ P F + + H+ + L+R P + +DF
Sbjct: 125 PRGFSLKFYTEEGN-WDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFWM 183
Query: 533 LRPETIHQLLYM 568
RPE+IHQ++++
Sbjct: 184 NRPESIHQVMFL 195
>U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catalase
protein.
Length = 496
Score = 124 bits (300), Expect = 4e-29
Identities = 55/77 (71%), Positives = 64/77 (83%)
Frame = +1
Query: 262 AKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIR 441
A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++KFYT++G WDLVGNNTPIFFIR
Sbjct: 93 ADMFHKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIR 152
Query: 442 DPTLFPSFIHTQKRTLQ 492
D FP+FIH KR Q
Sbjct: 153 DAIHFPNFIHALKRNPQ 169
Score = 116 bits (278), Expect = 2e-26
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +2
Query: 5 DQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIP 184
+QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDRERIP
Sbjct: 8 NQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIP 66
Query: 185 ERVVHAKGAGAFGYFEVTHDITK 253
ERVVHAKGAGA GYFEVTHDITK
Sbjct: 67 ERVVHAKGAGAHGYFEVTHDITK 89
>AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical
protein Y54G11A.13 protein.
Length = 512
Score = 124 bits (300), Expect = 4e-29
Identities = 55/77 (71%), Positives = 64/77 (83%)
Frame = +1
Query: 262 AKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIR 441
A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++KFYT++G WDLVGNNTPIFFIR
Sbjct: 108 ADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIR 167
Query: 442 DPTLFPSFIHTQKRTLQ 492
D FP+FIH KR Q
Sbjct: 168 DAIHFPNFIHALKRNPQ 184
Score = 114 bits (275), Expect = 4e-26
Identities = 71/192 (36%), Positives = 103/192 (53%), Gaps = 4/192 (2%)
Frame = +2
Query: 5 DQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIP 184
DQL Y+ ++ P +TT +GAP+ KTA+ T G+ GP L+QD+ ++DEM+ FDRERIP
Sbjct: 23 DQLKAYRDRNQE-PHLLTTSNGAPIYSKTAVLTAGRRGPMLMQDIVYMDEMAHFDRERIP 81
Query: 185 ERVVHAKGAGAFGYFEVTHDITKSVLPKYLSP*AKGHRLLLDSQQLVERVDXXXXXXXXX 364
ERVVHAKG GA GYFEVTHDITK + K LL+ + +
Sbjct: 82 ERVVHAKGGGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAG--ESGSADTVRD 139
Query: 365 XXXXSSILMMECGI*LEII---LP-FSL*EIQHYSRVLSILRREPCNTSERSDMFWDFLT 532
S E G +++ P F + + H+ + L+R P + +DF
Sbjct: 140 PRGFSLKFYTEEGN-WDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFWM 198
Query: 533 LRPETIHQLLYM 568
RPE+IHQ++++
Sbjct: 199 NRPESIHQVMFL 210
>AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.6 protein.
Length = 497
Score = 124 bits (300), Expect = 4e-29
Identities = 55/77 (71%), Positives = 64/77 (83%)
Frame = +1
Query: 262 AKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIR 441
A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++KFYT++G WDLVGNNTPIFFIR
Sbjct: 93 ADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIR 152
Query: 442 DPTLFPSFIHTQKRTLQ 492
D FP+FIH KR Q
Sbjct: 153 DAIHFPNFIHALKRNPQ 169
Score = 119 bits (287), Expect = 1e-27
Identities = 75/192 (39%), Positives = 104/192 (54%), Gaps = 4/192 (2%)
Frame = +2
Query: 5 DQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIP 184
+QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDRERIP
Sbjct: 8 NQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIP 66
Query: 185 ERVVHAKGAGAFGYFEVTHDITKSVLPKYLSP*AKGHRLLLDSQQLVERVDXXXXXXXXX 364
ERVVHAKGAGA GYFEVTHDITK + K LL+ + +
Sbjct: 67 ERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAG--ESGSADTVRD 124
Query: 365 XXXXSSILMMECGI*LEII---LP-FSL*EIQHYSRVLSILRREPCNTSERSDMFWDFLT 532
S E G +++ P F + + H+ + L+R P + +DF
Sbjct: 125 PRGFSLKFYTEEGN-WDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFWM 183
Query: 533 LRPETIHQLLYM 568
RPE+IHQ++++
Sbjct: 184 NRPESIHQVMFL 195
>U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical
protein F25B5.2 protein.
Length = 757
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -3
Query: 590 IRNPRSPTCKEVDGWSLVLRSKSPKTCRIFQMCCRVLF*VWIKLGNNVGSLIKKMGVLFP 411
+RN RS CK ++ W + + + T I+ M C+ W G + G+L
Sbjct: 634 LRNVRSGLCKSIEEWKRITKMRESSTMLIYPMFCQSEE-EWDSKGTIDAIFLMLDGILMN 692
Query: 410 TKSHTPS 390
TK P+
Sbjct: 693 TKRWMPN 699
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 2 TDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 172
T Q +NY LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 231 TSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 2 TDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 172
T Q +NY LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 231 TSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical
protein C23H4.2 protein.
Length = 583
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +2
Query: 11 LINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQ-----DVNF-LDEMSSFDR 172
L N+ K K SPG+ G ++ + + ++GP +L+ DV+F + EM+ FD+
Sbjct: 423 LTNFTKHGKPSPGWDPVDPGRMNYLELKVDSKARSGPVMLEGYHAKDVSFWVGEMTEFDQ 482
Query: 173 ERIPERVVHAKG 208
++ H++G
Sbjct: 483 N--VSKMRHSEG 492
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 392 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 303
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 392 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 303
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 392 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 303
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 1070 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1099
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 392 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 303
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 1048 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1077
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 392 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 303
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 392 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 303
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 53 ITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFE 232
+ T+ PV I I + N P Q + + +S D + + V +GAFG +
Sbjct: 83 VPTRRSEPVTITIHILDINDNSPQFEQPIYMANTTASGDERDVVKVVATDVDSGAFG--Q 140
Query: 233 VTHDITK 253
VT+ I +
Sbjct: 141 VTYTIAQ 147
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 53 ITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFE 232
+ T+ PV I I + N P Q + + +S D + + V +GAFG +
Sbjct: 83 VPTRRSEPVTITIHILDINDNSPQFEQPIYMANTTASGDERDVVKVVATDVDSGAFG--Q 140
Query: 233 VTHDITK 253
VT+ I +
Sbjct: 141 VTYTIAQ 147
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 158 SSFDRERIPERVVHAKGAGAF 220
SSFD+E++P+ VV K AG +
Sbjct: 1951 SSFDKEQVPQVVVPTKPAGGY 1971
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 388 DDGVWDLVGNNTPIFFIRDPTLFPSFIHT 474
D GVWD + +I D TL P +IH+
Sbjct: 253 DYGVWDTNACGSNDEYIGDKTLLPGYIHS 281
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 388 DDGVWDLVGNNTPIFFIRDPTLFPSFIHT 474
D GVWD + +I D TL P +IH+
Sbjct: 253 DYGVWDTNACGSNDEYIGDKTLLPGYIHS 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,742,833
Number of Sequences: 27780
Number of extensions: 322214
Number of successful extensions: 932
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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