Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0114
(604 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2... 97 8e-21
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P... 94 6e-20
At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to c... 90 9e-19
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c... 90 9e-19
At3g14205.1 68416.m01795 phosphoinositide phosphatase family pro... 31 0.59
At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family pr... 30 1.4
At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family pr... 29 3.1
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 29 3.1
At5g08090.1 68418.m00943 hypothetical protein 28 5.5
At3g59230.1 68416.m06603 F-box family protein contains F-box dom... 28 5.5
At1g17030.1 68414.m02069 expressed protein 28 5.5
At4g03000.2 68417.m00408 expressed protein contains similarity t... 27 7.2
At4g03000.1 68417.m00407 expressed protein contains similarity t... 27 7.2
At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)... 27 7.2
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 27 7.2
At1g06070.1 68414.m00636 bZIP transcription factor, putative (bZ... 27 7.2
At2g31390.1 68415.m03836 pfkB-type carbohydrate kinase family pr... 27 9.6
>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
GI:2511725 from [Arabidopsis thaliana]
Length = 492
Score = 97.1 bits (231), Expect = 8e-21
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = +1
Query: 250 QVSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPI 429
Q+++A G +TP+ VRFSTV E GS +T+RDPRGFAVKFYT +G +DLVGNN P+
Sbjct: 83 QLTSADFLRGPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPV 142
Query: 430 FFIRDPTLFPSFIHTQK-RTLQHI*KIRHVLGLFDLKTRDHPSTSLHV 570
FF+RD FP +H K HI + +L F HP SLH+
Sbjct: 143 FFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFS----HHPE-SLHM 185
Score = 95.5 bits (227), Expect = 2e-20
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +2
Query: 38 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGA 217
DSP F TT SGAPV + TVG GP LL+D + L+++++FDRERIPERVVHA+GA A
Sbjct: 13 DSP-FFTTNSGAPVWNNNSSLTVGTRGPILLEDYHLLEKLANFDRERIPERVVHARGASA 71
Query: 218 FGYFEVTHDITKSVLPKYL 274
G+FEVTHDIT+ +L
Sbjct: 72 KGFFEVTHDITQLTSADFL 90
>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2
SP:P25819, GI:17865693 from [Arabidopsis thaliana]
Length = 492
Score = 94.3 bits (224), Expect = 6e-20
Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +1
Query: 253 VSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIF 432
++ A + G +TP+ VRFSTV E GS +T+RDPRGFAVKFYT +G +DLVGNN P+F
Sbjct: 84 LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVF 143
Query: 433 FIRDPTLFPSFIHTQK-RTLQHI*KIRHVLGLF 528
FIRD FP +H K HI + +L F
Sbjct: 144 FIRDGMKFPDMVHALKPNPKSHIQENWRILDFF 176
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = +2
Query: 38 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGA 217
+SP F TT SGAPV + TVG GP LL+D + ++++++FDRERIPERVVHA+GA A
Sbjct: 13 NSP-FFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASA 71
Query: 218 FGYFEVTHDITKSVLPKYL 274
G+FEVTHDI+ +L
Sbjct: 72 KGFFEVTHDISNLTCADFL 90
>At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 427
Score = 90.2 bits (214), Expect = 9e-19
Identities = 42/76 (55%), Positives = 53/76 (69%)
Frame = +1
Query: 253 VSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIF 432
++ A + G +TP+ VRFSTV E S +T+RD RGFAVKFYT +G +DLVGNNTP+F
Sbjct: 84 LTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVKFYTREGNFDLVGNNTPVF 143
Query: 433 FIRDPTLFPSFIHTQK 480
FIRD FP +H K
Sbjct: 144 FIRDGIQFPDVVHALK 159
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = +2
Query: 20 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVH 199
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVVH
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVH 65
Query: 200 AKGAGAFGYFEVTHDITKSVLPKYL 274
A+G A G+FEVTHDI+ +L
Sbjct: 66 ARGISAKGFFEVTHDISNLTCADFL 90
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 492
Score = 90.2 bits (214), Expect = 9e-19
Identities = 42/76 (55%), Positives = 53/76 (69%)
Frame = +1
Query: 253 VSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIF 432
++ A + G +TP+ VRFSTV E S +T+RD RGFAVKFYT +G +DLVGNNTP+F
Sbjct: 84 LTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVKFYTREGNFDLVGNNTPVF 143
Query: 433 FIRDPTLFPSFIHTQK 480
FIRD FP +H K
Sbjct: 144 FIRDGIQFPDVVHALK 159
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = +2
Query: 20 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVH 199
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVVH
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVH 65
Query: 200 AKGAGAFGYFEVTHDITKSVLPKYL 274
A+G A G+FEVTHDI+ +L
Sbjct: 66 ARGISAKGFFEVTHDISNLTCADFL 90
>At3g14205.1 68416.m01795 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain; identical to SAC domain protein 2
(SAC2) GI:31415720
Length = 808
Score = 31.1 bits (67), Expect = 0.59
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 397 LHHQYRTLQQNLEGHEQYQQIHSLHQ-LLRI*QQSVSFCLWTQIL 266
+H R L N+EGH Y+ + ++ L R + +V C+WT L
Sbjct: 176 MHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVAL 220
>At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 326
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 29 TLKDSPGFITTKSGAPVGIKTAIQTVG 109
+L D+PGFI GAP + AI +G
Sbjct: 29 SLADAPGFIKAPGGAPANVAIAISRLG 55
>At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family
protein similar to fructokinase GI:2102693 from
[Lycopersicon esculentum]
Length = 345
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 29 TLKDSPGFITTKSGAPVGIKTAIQTVG 109
+L +SPGF+ GAP + A+ +G
Sbjct: 29 SLSESPGFLKAPGGAPANVAIAVSRLG 55
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 67 WSSCWNQNGDTNGGQEWS 120
WS WN NG T EWS
Sbjct: 868 WSDGWNNNGGTKEKNEWS 885
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 67 WSSCWNQNGDTNG-GQEWSS 123
WS W+ NG TNG QE SS
Sbjct: 901 WSDGWDNNGGTNGINQEGSS 920
>At5g08090.1 68418.m00943 hypothetical protein
Length = 322
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 400 WDLVGNNTPIFFIRDPTLFPSFIHTQKRTLQHI*KIRHVLGLFDLKTRDHPSTSL---HV 570
W +VG +F+ L+P+F H ++ + I++V G+ + HP T+L H+
Sbjct: 34 WLIVGVEMYLFW----PLYPNFPHVWGDSVMGMVMIQYVTGVISYASMSHPLTALTFSHI 89
Query: 571 GDRGFLMVQTY 603
R + Y
Sbjct: 90 ATRYVYLYSIY 100
>At3g59230.1 68416.m06603 F-box family protein contains F-box domain
Pfam:PF00646
Length = 491
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 442 LL*RKWEYYFQLNPTLHHQYRTLQQNLEGHEQYQQIHS 329
LL RKW Y+F P L Q G+++ +IH+
Sbjct: 39 LLSRKWRYFFAFVPNLDFDDPVRMQPDMGNQEETEIHT 76
>At1g17030.1 68414.m02069 expressed protein
Length = 502
Score = 27.9 bits (59), Expect = 5.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 403 PTLHHQYRTLQQNLEGH 353
P++HH+Y +L N EGH
Sbjct: 190 PSMHHEYTSLVDNEEGH 206
>At4g03000.2 68417.m00408 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 216 APAPLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGAPDLVVMK 49
APAP+A +SG K +S++ A P+ T + + IP D +++K
Sbjct: 417 APAPVASEKKSGSEPEEKPSVSTKPAPDYYAAIPYDAT--LGIYIPRNKRDELILK 470
>At4g03000.1 68417.m00407 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 216 APAPLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGAPDLVVMK 49
APAP+A +SG K +S++ A P+ T + + IP D +++K
Sbjct: 417 APAPVASEKKSGSEPEEKPSVSTKPAPDYYAAIPYDAT--LGIYIPRNKRDELILK 470
>At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 526
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 180 IRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGA 70
+R S D++++ L + N+ GP + I VL+P G+
Sbjct: 119 VRKESNSDLNAKSLENGNEQGPQTYPMHIPVLVPLGS 155
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 180 IRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGA 70
+R S D++++ L + N+ GP + I VL+P G+
Sbjct: 201 VRKESNSDLNAKSLENGNEQGPQTYPMHIPVLVPLGS 237
>At1g06070.1 68414.m00636 bZIP transcription factor, putative
(bZIP69) similar to transcriptional activator RF2a
GB:AF005492 GI:2253277 from [Oryza sativa]; contains
Pfam profile PF00170: bZIP transcription factor
Length = 423
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 391 HQYRTLQQNLEGHEQYQQIHSLHQLLRI*QQ 299
HQ + QQ + H Q QQ++ L Q R+ QQ
Sbjct: 359 HQQQQQQQQQQFHFQQQQLYQLQQQQRLQQQ 389
>At2g31390.1 68415.m03836 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 325
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 29 TLKDSPGFITTKSGAPVGIKTAIQTVG 109
+L ++PGF+ GAP + A+ +G
Sbjct: 28 SLAEAPGFLKAPGGAPANVAIAVSRLG 54
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,054,951
Number of Sequences: 28952
Number of extensions: 305792
Number of successful extensions: 808
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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