Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0110
(490 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p pro... 53 2e-07
BT010292-1|AAQ23610.1| 662|Drosophila melanogaster LD16296p pro... 29 3.4
BT001262-1|AAN71018.1| 833|Drosophila melanogaster AT02677p pro... 29 3.4
AE014134-226|AAF51398.3| 662|Drosophila melanogaster CG4896-PB,... 29 3.4
AE014134-225|AAF51399.3| 662|Drosophila melanogaster CG4896-PA,... 29 3.4
AE014134-224|AAN10483.2| 949|Drosophila melanogaster CG4896-PD,... 29 3.4
AE014134-223|AAN10482.2| 968|Drosophila melanogaster CG4896-PC,... 29 3.4
AE014296-3256|AAF49087.1| 720|Drosophila melanogaster CG17732-P... 28 6.0
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 28 7.9
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro... 28 7.9
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro... 28 7.9
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 28 7.9
>BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p
protein.
Length = 46
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 EHKCWDPKDGELCLVRSQSGETLMEDRSDSD 254
EH C DPKDGEL L+R +SGETLMEDR+ SD
Sbjct: 9 EHICCDPKDGELYLIRLKSGETLMEDRNSSD 39
>BT010292-1|AAQ23610.1| 662|Drosophila melanogaster LD16296p
protein.
Length = 662
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 163 STNAGTRKMVNYAWS-GRSQGKP-*WRTVAILTANRSSELGIGAKD*SNHLVAGS 321
STN G+R M WS G+ GK RT I RS+ +G+G + H+ G+
Sbjct: 593 STNVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 645
>BT001262-1|AAN71018.1| 833|Drosophila melanogaster AT02677p
protein.
Length = 833
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 163 STNAGTRKMVNYAWS-GRSQGKP-*WRTVAILTANRSSELGIGAKD*SNHLVAGS 321
STN G+R M WS G+ GK RT I RS+ +G+G + H+ G+
Sbjct: 764 STNVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 816
>AE014134-226|AAF51398.3| 662|Drosophila melanogaster CG4896-PB,
isoform B protein.
Length = 662
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 163 STNAGTRKMVNYAWS-GRSQGKP-*WRTVAILTANRSSELGIGAKD*SNHLVAGS 321
STN G+R M WS G+ GK RT I RS+ +G+G + H+ G+
Sbjct: 593 STNVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 645
>AE014134-225|AAF51399.3| 662|Drosophila melanogaster CG4896-PA,
isoform A protein.
Length = 662
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 163 STNAGTRKMVNYAWS-GRSQGKP-*WRTVAILTANRSSELGIGAKD*SNHLVAGS 321
STN G+R M WS G+ GK RT I RS+ +G+G + H+ G+
Sbjct: 593 STNVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 645
>AE014134-224|AAN10483.2| 949|Drosophila melanogaster CG4896-PD,
isoform D protein.
Length = 949
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 163 STNAGTRKMVNYAWS-GRSQGKP-*WRTVAILTANRSSELGIGAKD*SNHLVAGS 321
STN G+R M WS G+ GK RT I RS+ +G+G + H+ G+
Sbjct: 880 STNVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 932
>AE014134-223|AAN10482.2| 968|Drosophila melanogaster CG4896-PC,
isoform C protein.
Length = 968
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 163 STNAGTRKMVNYAWS-GRSQGKP-*WRTVAILTANRSSELGIGAKD*SNHLVAGS 321
STN G+R M WS G+ GK RT I RS+ +G+G + H+ G+
Sbjct: 899 STNVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 951
>AE014296-3256|AAF49087.1| 720|Drosophila melanogaster CG17732-PA
protein.
Length = 720
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 246 RYGPPSGFPLTAT*PGIVHHLSGPSICAQSA 154
R G P F TA ++HH+ P++C + A
Sbjct: 303 RSGSPEDFGQTALCQQLIHHIVQPNVCNEDA 333
>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
chromodomain-helicase-DNA-bindingprotein protein.
Length = 1883
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 195 VHHLSGPSICAQSAPSFTDWKR 130
+HHL GP +C + T W+R
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQR 594
>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p
protein.
Length = 1645
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 195 VHHLSGPSICAQSAPSFTDWKR 130
+HHL GP +C + T W+R
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQR 594
>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
protein.
Length = 1101
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 195 VHHLSGPSICAQSAPSFTDWKR 130
+HHL GP +C + T W+R
Sbjct: 41 IHHLYGPFLCVVPLSTMTAWQR 62
>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
protein.
Length = 1883
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 195 VHHLSGPSICAQSAPSFTDWKR 130
+HHL GP +C + T W+R
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQR 594
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,014,019
Number of Sequences: 53049
Number of extensions: 439744
Number of successful extensions: 941
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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