Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0106
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   2.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.1  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   9.5  
AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative odorant-b...    23   9.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = -2

Query: 575 PLNGGRTESCRSRTKRNRHDLRQEDPRKAGERGSGSSPKR 456
           P +GGR  SCRS   R R   R   P         S PKR
Sbjct: 262 PRSGGRWPSCRSPPARRRS--RSTRPTSWPRSRPTSKPKR 299


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 533  KRNRHDLRQEDPRKAGER 480
            K  R+D  +EDP++AG +
Sbjct: 949  KNTRYDYNKEDPQEAGRK 966


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 156 PSPEFSRSAESIRTPPQMRCSSRSEPY 76
           P P  + + E    PP++ C+   E Y
Sbjct: 39  PEPSTTEATEEESPPPKIECTDPREVY 65


>AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative
           odorant-binding protein OBPjj11 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 591 HGQGESDCLI-KTKHCDGPRGC*RNVISAQC 680
           +GQ ++D L+ + ++ DGP  C R+    QC
Sbjct: 95  YGQEKADELVARCRNNDGPDACERSFRLLQC 125


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,338
Number of Sequences: 2352
Number of extensions: 17465
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)