Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0106
(711 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.53
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.53
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.53
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.53
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 0.53
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.53
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.2
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 6.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.6
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.53
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 560 RTESCRSRTKRNRHDLRQEDPRKAGERGSGSSPKRK 453
RT SC SR + +RH+ R R GER R+
Sbjct: 226 RTSSCHSRYEDSRHEDR-NSYRNDGERSCSRDRSRE 260
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.53
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 560 RTESCRSRTKRNRHDLRQEDPRKAGERGSGSSPKRK 453
RT SC SR + +RH+ R R GER R+
Sbjct: 226 RTSSCHSRYEDSRHEDR-NSYRNDGERSCSRDRSRE 260
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.53
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 560 RTESCRSRTKRNRHDLRQEDPRKAGERGSGSSPKRK 453
RT SC SR + +RH+ R R GER R+
Sbjct: 226 RTSSCHSRYEDSRHEDR-NSYRNDGERSCSRDRSRE 260
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.53
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 560 RTESCRSRTKRNRHDLRQEDPRKAGERGSGSSPKRK 453
RT SC SR + +RH+ R R GER R+
Sbjct: 226 RTSSCHSRYEDSRHEDR-NSYRNDGERSCSRDRSRE 260
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.4 bits (53), Expect = 0.53
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 560 RTESCRSRTKRNRHDLRQEDPRKAGERGSGSSPKRK 453
RT SC SR + +RH+ R R GER R+
Sbjct: 226 RTSSCHSRYEDSRHEDR-NSYRNDGERSCSRDRSRE 260
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.53
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 560 RTESCRSRTKRNRHDLRQEDPRKAGERGSGSSPKRK 453
RT SC SR + +RH+ R R GER R+
Sbjct: 226 RTSSCHSRYEDSRHEDR-NSYRNDGERSCSRDRSRE 260
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 560 RTESCRSRTKRNRHDLRQEDPRKAGERGSGSSPKRK 453
RT SC SR + RH+ R R GER R+
Sbjct: 226 RTSSCHSRYEDLRHEDR-NSYRNDGERSCSRDRSRE 260
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 560 RTESCRSRTKRNRHDLRQEDPRKAGERGSGSSPKRK 453
RT SC SR + +RH+ R GER R+
Sbjct: 226 RTSSCHSRYEDSRHE-DGNSYRNDGERSCSRDRSRE 260
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 351 RPGTGPHPLPVQTRHAPVLRANPYSEV 271
+ G P PLP A + + +PYS +
Sbjct: 647 KDGQSPFPLPPNLASANISQLDPYSSL 673
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 87 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 4
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 6.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 287 ILIPKLRIQFATSLTYIILSTRG 219
I+IP + I F T LT+ + S G
Sbjct: 251 IIIPCMGISFLTVLTFYLPSDSG 273
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 6.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 287 ILIPKLRIQFATSLTYIILSTRG 219
I+IP + I F T LT+ + S G
Sbjct: 251 IIIPCMGISFLTVLTFYLPSDSG 273
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,847
Number of Sequences: 438
Number of extensions: 5479
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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