Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0101
         (509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   3.2  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   4.2  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   4.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   9.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   9.8  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 280 SSLENHYFHCFITYSVGRK 336
           SS    +FHC+     GRK
Sbjct: 420 SSFFQQFFHCYCPVRFGRK 438


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 259 VGDXFARSSLENHYFHCFI 315
           + +  A   L N Y+ CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 259 VGDXFARSSLENHYFHCFI 315
           + +  A   L N Y+ CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +3

Query: 399 TWRKRSSPFKTPA*SGSRTLPGGEFDWG 482
           +WR   S F     +G   + G  F WG
Sbjct: 227 SWRITHSYFMPDPLAGDYNIGGLNFQWG 254


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 387 TLGTTHRAPADIIDRAPLPPNRVSNET 307
           TLG T     D+I R P   N++  ET
Sbjct: 334 TLGNTLVFLFDLIGRNPTVQNKLYEET 360


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 255 STPLMSPYNARLESSSTGSAFPA 187
           S+P  +P  A   SSST S+ PA
Sbjct: 509 SSPSPNPRIASAPSSSTSSSPPA 531


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 252 TPLMSPYNARLESSSTGSAFPADSP 178
           TP+ + Y   +E+ +  S F  D+P
Sbjct: 31  TPIKNVYKNNIETKNQLSPFNIDTP 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,702
Number of Sequences: 438
Number of extensions: 3114
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)