Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0097
(620 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001681-1|AAN71436.1| 168|Drosophila melanogaster RE56164p pro... 48 8e-06
AE014297-4657|AAF57081.1| 159|Drosophila melanogaster CG11314-P... 48 8e-06
AY075563-1|AAL68370.1| 134|Drosophila melanogaster RH68460p pro... 45 1e-04
AY071674-1|AAL49296.1| 157|Drosophila melanogaster RH04252p pro... 45 1e-04
AE014297-4659|AAF57082.1| 157|Drosophila melanogaster CG11315-P... 45 1e-04
AE014297-4658|AAN14257.1| 130|Drosophila melanogaster CG11315-P... 45 1e-04
>BT001681-1|AAN71436.1| 168|Drosophila melanogaster RE56164p
protein.
Length = 168
Score = 48.4 bits (110), Expect = 8e-06
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +3
Query: 87 VVTTRLCREVDASACTVNEVRIDPC---VNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTA 257
VV C + CT+ +VR+ PC +N+ C++++ N+++SFDFTP F L A
Sbjct: 34 VVNFEPCPD-SVDTCTIQQVRVSPCPEALNNAACNIRRKHNSEMSFDFTPNFDADTL-VA 91
Query: 258 SLG 266
SLG
Sbjct: 92 SLG 94
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 298 SLQCDACTLTSCPTEAGKTQTLDFSLHIGKKLPTGNFEFKWKLWNEDNESQMCCYRTNVR 477
+L AC T CP +G QT + I K P + +W L + + CC+ +++
Sbjct: 107 TLDSAACKYTPCPVRSGVKQTYTTLVPIEAKFPLSPYTIRWAL-KDPVSQKRCCFTIDIK 165
Query: 478 LV 483
+V
Sbjct: 166 VV 167
>AE014297-4657|AAF57081.1| 159|Drosophila melanogaster CG11314-PA
protein.
Length = 159
Score = 48.4 bits (110), Expect = 8e-06
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +3
Query: 87 VVTTRLCREVDASACTVNEVRIDPC---VNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTA 257
VV C + CT+ +VR+ PC +N+ C++++ N+++SFDFTP F L A
Sbjct: 25 VVNFEPCPD-SVDTCTIQQVRVSPCPEALNNAACNIRRKHNSEMSFDFTPNFDADTL-VA 82
Query: 258 SLG 266
SLG
Sbjct: 83 SLG 85
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 298 SLQCDACTLTSCPTEAGKTQTLDFSLHIGKKLPTGNFEFKWKLWNEDNESQMCCYRTNVR 477
+L AC T CP +G QT + I K P + +W L + + CC+ +++
Sbjct: 98 TLDSAACKYTPCPVRSGVKQTYTTLVPIEAKFPLSPYTIRWAL-KDPVSQKRCCFTIDIK 156
Query: 478 LV 483
+V
Sbjct: 157 VV 158
>AY075563-1|AAL68370.1| 134|Drosophila melanogaster RH68460p
protein.
Length = 134
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 87 VVTTRLCREVDASACTVNEVRIDPCVNSRL---CHLKKGKNAKVSFDFTPQFSTTKLKTA 257
+V + C + +C++++VR+ PC + CH+++ +SFDFTP F L A
Sbjct: 23 IVNFQTCED-SVDSCSISQVRVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTL-VA 80
Query: 258 SLG*RMALKFLLMLSTM 308
SLG + L L TM
Sbjct: 81 SLGWAKSENVELPLLTM 97
>AY071674-1|AAL49296.1| 157|Drosophila melanogaster RH04252p
protein.
Length = 157
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 87 VVTTRLCREVDASACTVNEVRIDPCVNSRL---CHLKKGKNAKVSFDFTPQFSTTKLKTA 257
+V + C + +C++++VR+ PC + CH+++ +SFDFTP F L A
Sbjct: 23 IVNFQTCED-SVDSCSISQVRVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTL-VA 80
Query: 258 SLG*RMALKFLLMLSTM 308
SLG + L L TM
Sbjct: 81 SLGWAKSENVELPLLTM 97
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +1
Query: 310 DACTLTSCPTEAGKTQTLDFSLHIGKKLPTGNFEFKWKLWNEDNESQMCCYRTNVRLV 483
+AC T+CP +G TQT ++ + P + +W L + + CC+ ++++V
Sbjct: 100 EACKYTTCPVRSGVTQTYTNNMPADARFPLSPYTIRWAL-KDPVSQKRCCFTIDIKVV 156
>AE014297-4659|AAF57082.1| 157|Drosophila melanogaster CG11315-PA,
isoform A protein.
Length = 157
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 87 VVTTRLCREVDASACTVNEVRIDPCVNSRL---CHLKKGKNAKVSFDFTPQFSTTKLKTA 257
+V + C + +C++++VR+ PC + CH+++ +SFDFTP F L A
Sbjct: 23 IVNFQTCED-SVDSCSISQVRVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTL-VA 80
Query: 258 SLG*RMALKFLLMLSTM 308
SLG + L L TM
Sbjct: 81 SLGWAKSENVELPLLTM 97
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +1
Query: 310 DACTLTSCPTEAGKTQTLDFSLHIGKKLPTGNFEFKWKLWNEDNESQMCCYRTNVRLV 483
+AC T+CP +G TQT ++ + P + +W L + + CC+ ++++V
Sbjct: 100 EACKYTTCPVRSGVTQTYTNNMPADARFPLSPYTIRWAL-KDPVSQKRCCFTIDIKVV 156
>AE014297-4658|AAN14257.1| 130|Drosophila melanogaster CG11315-PB,
isoform B protein.
Length = 130
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 87 VVTTRLCREVDASACTVNEVRIDPCVNSRL---CHLKKGKNAKVSFDFTPQFSTTKLKTA 257
+V + C + +C++++VR+ PC + CH+++ +SFDFTP F L A
Sbjct: 23 IVNFQTCED-SVDSCSISQVRVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTL-VA 80
Query: 258 SLG*RMALKFLLMLSTM 308
SLG + L L TM
Sbjct: 81 SLGWAKSENVELPLLTM 97
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,434,199
Number of Sequences: 53049
Number of extensions: 584652
Number of successful extensions: 1774
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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