BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVf0032 (636 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0584 + 4345134-4345237,4346165-4346267,4346397-4346466,434... 53 2e-07 03_06_0300 + 32967935-32968029,32968975-32969077,32969175-329692... 52 3e-07 05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 48 5e-06 07_01_1123 - 10385215-10385574,10385676-10385810,10386385-103870... 30 1.3 01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559... 30 1.3 11_08_0034 - 27827583-27827998,27828111-27829430,27829568-27831008 29 2.3 11_08_0032 - 27807489-27807497,27807641-27807684,27808046-278081... 29 2.3 08_02_0092 + 12265446-12265809,12266147-12266743,12266792-122668... 28 5.4 12_01_1079 - 11223247-11223336,11223606-11223717,11224743-112248... 28 7.1 06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228... 28 7.1 02_05_0074 - 25608689-25609138 28 7.1 12_02_0412 - 18799217-18801061 27 9.4 05_01_0068 + 475647-476006 27 9.4 01_06_0944 + 33211652-33212427,33212492-33212660,33212825-332129... 27 9.4 01_01_0363 + 2850954-2853675,2853819-2854225 27 9.4 >07_01_0584 + 4345134-4345237,4346165-4346267,4346397-4346466, 4346552-4346590,4346684-4346801,4346894-4346951, 4347031-4347095,4347281-4347341,4347678-4347779, 4348005-4348070,4348399-4348443,4348540-4348797, 4349289-4349501,4350103-4350411,4350461-4350613 Length = 587 Score = 52.8 bits (121), Expect = 2e-07 Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 2/85 (2%) Frame = -1 Query: 504 QGFSWRGGSERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDS--ESTVRDCATVFA 331 +GF + T GI +W + ++ G KV+++ LDT+G F+S +S V D +FA Sbjct: 92 KGFGVGHMRDTKTKGIWVWGTPIELDVN-GSKVSVLYLDTEG-FESIGKSNVYD-DRIFA 148 Query: 330 LSTMLSSVQIYNLSQNIQEDDLQHL 256 L+T+LSS+ IYNL + I+E D+ L Sbjct: 149 LATVLSSILIYNLPETIREADISRL 173 >03_06_0300 + 32967935-32968029,32968975-32969077,32969175-32969244, 32969464-32969581,32969687-32969744,32969831-32969895, 32969990-32969996,32970087-32970147,32970757-32970776, 32970858-32970923,32971126-32971293,32971372-32971629, 32972098-32972310,32972824-32973099 Length = 525 Score = 52.4 bits (120), Expect = 3e-07 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%) Frame = -1 Query: 462 GILMWSEIFKATLDDGEKVAIILLDTQGAFDS--ESTVRDCATVFALSTMLSSVQIYNLS 289 GI +W + +D G KV+++ LDT+G F+S +S V D +FAL+T+LSSV IYNL Sbjct: 90 GIWIWGTPVEMDID-GSKVSVLYLDTEG-FESVGKSNVYD-DRIFALATVLSSVLIYNLP 146 Query: 288 QNIQEDDLQHL 256 + ++E D+ L Sbjct: 147 ETVREADISRL 157 >05_07_0116 - 27785083-27786123,27786201-27786278,27786364-27786976, 27787128-27787213,27787316-27787438,27787600-27787734, 27787930-27788019,27788796-27788981,27789560-27789661, 27789787-27789900,27790010-27790153,27790260-27790325, 27790895-27791056,27791668-27791916 Length = 1062 Score = 48.4 bits (110), Expect = 5e-06 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = -1 Query: 468 TTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQIYNLS 289 T G+ MWS K T DG + ++LLDT+G + T +F+L+ +LSS+ IYN Sbjct: 101 TKGLWMWSAPLKRTGLDGTEYNLVLLDTEGIDAYDQTGTYSIQIFSLAVLLSSMFIYNQM 160 Query: 288 QNIQEDDLQHLH-CSQSTVGWRSRTGAG 208 I E L L ++ T R R G Sbjct: 161 GGIDEAALDRLSLVTEMTKHIRVRASGG 188 >07_01_1123 - 10385215-10385574,10385676-10385810,10386385-10387091, 10387158-10387455 Length = 499 Score = 30.3 bits (65), Expect = 1.3 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -2 Query: 245 RVRSAGARGRGPDSLPAAAVPRARLELPLRSALRSGRRH 129 R R GA +G D +P A P + LPL + R GR H Sbjct: 23 RKRGRGAT-KGDDPVPDEAAPPCKPSLPLATGSRRGRSH 60 >01_06_0293 - 28254673-28254878,28255189-28255306,28255767-28255961, 28256701-28256800,28256887-28256972,28257078-28257239, 28257965-28258101,28258233-28258281,28258688-28258746, 28258862-28258896,28259384-28259433,28260173-28260332, 28260898-28260963,28261065-28261162,28261649-28261696, 28262114-28262242,28262667-28262769,28262858-28262954, 28263181-28263241,28263659-28263740,28263845-28263962, 28264039-28266325 Length = 1481 Score = 30.3 bits (65), Expect = 1.3 Identities = 14/40 (35%), Positives = 25/40 (62%) Frame = -3 Query: 139 DGGMQILSRRLKVSDKQHPELQSLRKHITACFSELACFLM 20 DG +QI SR++K S + P+L + K + C E++ F++ Sbjct: 1043 DGSVQIFSRQMKESTSRFPDLVGMIKEL--CSIEVSSFIL 1080 >11_08_0034 - 27827583-27827998,27828111-27829430,27829568-27831008 Length = 1058 Score = 29.5 bits (63), Expect = 2.3 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = -1 Query: 480 SERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQI 301 +E + G+ + ++FK LDDG VAI +L+ Q S +C V ++ + ++I Sbjct: 750 NEDNLLGVGSFGKVFKGRLDDGLVVAIKILNMQVERAIRSFDAEC-HVLRMARHRNLIKI 808 Query: 300 YNLSQNI 280 N N+ Sbjct: 809 LNTCSNL 815 >11_08_0032 - 27807489-27807497,27807641-27807684,27808046-27808168, 27810770-27810983,27811382-27811530,27811719-27812618, 27812964-27814659 Length = 1044 Score = 29.5 bits (63), Expect = 2.3 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = -1 Query: 480 SERDTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRDCATVFALSTMLSSVQI 301 +E + G+ + ++FK LDDG VAI +L+ Q S +C V ++ + ++I Sbjct: 695 NEDNLLGVGSFGKVFKGRLDDGLVVAIKILNMQVERAIRSFDAEC-HVLRMARHRNLIKI 753 Query: 300 YNLSQNI 280 N N+ Sbjct: 754 LNTCSNL 760 >08_02_0092 + 12265446-12265809,12266147-12266743,12266792-12266861, 12267325-12267427 Length = 377 Score = 28.3 bits (60), Expect = 5.4 Identities = 9/32 (28%), Positives = 14/32 (43%) Frame = +3 Query: 279 GCFARGCISERTTASWTERTRSRSLAPWIHCR 374 G CI + + W+ + S A W+ CR Sbjct: 221 GSLGFACIEDSSLYVWSRKVNSEGAAEWVQCR 252 >12_01_1079 - 11223247-11223336,11223606-11223717,11224743-11224825, 11226061-11226173,11226261-11226337,11228626-11228719, 11229072-11229160,11230485-11230560,11231637-11231808 Length = 301 Score = 27.9 bits (59), Expect = 7.1 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +2 Query: 5 ESRVRHEEAGQLRE-ARRYVLAEGLQLWMLFV*YL*SS*QYLH-AAVRS 145 E V EE G E A++Y ++ GL W L Y + +Y H +VRS Sbjct: 235 EYEVLDEEPGDDEESAQKYEISPGLSFWFLVCFYYNNQIRYCHDTSVRS 283 >06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609, 2287186-2287257,2287762-2287842,2288059-2288133, 2288197-2288484 Length = 451 Score = 27.9 bits (59), Expect = 7.1 Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Frame = -3 Query: 469 HDRHTHVVRDIQSDAR*W*KGSDNIARHARRLRQ*I---HGARLRDRVRSVHDAVVRSDI 299 HDRH RD D R S N+ R R R HG R RS R++ Sbjct: 310 HDRHAREDRD--RDYRRSSYSSRNVDRQGRERRDRDSDRHGRSSARRSRSRSPNRGRTEG 367 Query: 298 QPLAKHPGGRPPAPS 254 + P GRPP PS Sbjct: 368 ENHRSSPFGRPPEPS 382 >02_05_0074 - 25608689-25609138 Length = 149 Score = 27.9 bits (59), Expect = 7.1 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -2 Query: 206 SLPAAAVPRARLELPLRSALRSGRRHADTVKKIKGIRQTASRAAVPPQ 63 S AAA R LP R+ LR+ R A T + + A AAV P+ Sbjct: 22 SAAAAAAARCLGPLPRRARLRTARHVALTPRDLSAEDVAAEEAAVAPK 69 >12_02_0412 - 18799217-18801061 Length = 614 Score = 27.5 bits (58), Expect = 9.4 Identities = 9/29 (31%), Positives = 21/29 (72%) Frame = -3 Query: 118 SRRLKVSDKQHPELQSLRKHITACFSELA 32 ++ +K + ++HP LQ +R+ + C+S+L+ Sbjct: 67 NKSIKKALEKHPTLQGMRRILRICYSDLS 95 >05_01_0068 + 475647-476006 Length = 119 Score = 27.5 bits (58), Expect = 9.4 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = -1 Query: 396 LLDTQGAFDSESTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLHCSQSTVGWRS 223 LL + + + D A+ LS +L + Q +L L H H + +T GWR+ Sbjct: 58 LLSHRPKWGGAANKEDAASCSGLSFLLPTHQPRSLPPAASSTPLPHHHPAGATAGWRN 115 >01_06_0944 + 33211652-33212427,33212492-33212660,33212825-33212936, 33213061-33213159,33213237-33213394,33214911-33215062, 33215162-33215249,33215399-33215476,33215516-33215690, 33216701-33217002 Length = 702 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -1 Query: 471 DTTGILMWSEIFKATLDDGEKVAIILLDTQGAFDSESTVRD 349 DT+GILM+ + DG + + GA D+E+T+ D Sbjct: 97 DTSGILMFDTSGNLVILDGRGSSFTVAYGSGAKDTEATILD 137 >01_01_0363 + 2850954-2853675,2853819-2854225 Length = 1042 Score = 27.5 bits (58), Expect = 9.4 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -1 Query: 480 SERDTTGILMWSEIFKATL-DDGEKVAIILLDTQGAFDSESTVRDC 346 SE + G + ++K TL D+GE VAI + D + S S +C Sbjct: 722 SEANLLGKGRYGSVYKCTLQDEGEPVAIKVFDLKQLGSSRSFQAEC 767 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,776,566 Number of Sequences: 37544 Number of extensions: 374500 Number of successful extensions: 1431 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1371 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1429 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1561213104 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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