Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20933
         (537 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003563-1|AAO39567.1|  443|Drosophila melanogaster LP03430p pro...   143   1e-34
AY069697-1|AAL39842.1|  443|Drosophila melanogaster LD46767p pro...   143   1e-34
AE014134-1641|AAF52777.1|  443|Drosophila melanogaster CG4422-PA...   143   1e-34
L03209-1|AAA28567.1|  448|Drosophila melanogaster GDP dissociati...   142   3e-34
AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-P...    29   5.3  

>BT003563-1|AAO39567.1|  443|Drosophila melanogaster LP03430p
           protein.
          Length = 443

 Score =  143 bits (347), Expect = 1e-34
 Identities = 66/85 (77%), Positives = 74/85 (87%)
 Frame = +2

Query: 2   FIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYDATT 181
           F+ MVSTTVET +PE EI+PGL LL  I QKFV+++DY EPIDDGS+SQIFISESYDATT
Sbjct: 349 FVGMVSTTVETENPEVEIKPGLDLLEPIAQKFVTISDYLEPIDDGSESQIFISESYDATT 408

Query: 182 HFETTCLDVLKIYKHGTGEEFDFSK 256
           HFETTCLDVL I+K GTGE FDFSK
Sbjct: 409 HFETTCLDVLNIFKRGTGETFDFSK 433


>AY069697-1|AAL39842.1|  443|Drosophila melanogaster LD46767p
           protein.
          Length = 443

 Score =  143 bits (347), Expect = 1e-34
 Identities = 66/85 (77%), Positives = 74/85 (87%)
 Frame = +2

Query: 2   FIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYDATT 181
           F+ MVSTTVET +PE EI+PGL LL  I QKFV+++DY EPIDDGS+SQIFISESYDATT
Sbjct: 349 FVGMVSTTVETENPEVEIKPGLDLLEPIAQKFVTISDYLEPIDDGSESQIFISESYDATT 408

Query: 182 HFETTCLDVLKIYKHGTGEEFDFSK 256
           HFETTCLDVL I+K GTGE FDFSK
Sbjct: 409 HFETTCLDVLNIFKRGTGETFDFSK 433


>AE014134-1641|AAF52777.1|  443|Drosophila melanogaster CG4422-PA
           protein.
          Length = 443

 Score =  143 bits (347), Expect = 1e-34
 Identities = 66/85 (77%), Positives = 74/85 (87%)
 Frame = +2

Query: 2   FIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYDATT 181
           F+ MVSTTVET +PE EI+PGL LL  I QKFV+++DY EPIDDGS+SQIFISESYDATT
Sbjct: 349 FVGMVSTTVETENPEVEIKPGLDLLEPIAQKFVTISDYLEPIDDGSESQIFISESYDATT 408

Query: 182 HFETTCLDVLKIYKHGTGEEFDFSK 256
           HFETTCLDVL I+K GTGE FDFSK
Sbjct: 409 HFETTCLDVLNIFKRGTGETFDFSK 433


>L03209-1|AAA28567.1|  448|Drosophila melanogaster GDP dissociation
           inhibitor protein.
          Length = 448

 Score =  142 bits (344), Expect = 3e-34
 Identities = 71/99 (71%), Positives = 80/99 (80%), Gaps = 3/99 (3%)
 Frame = +2

Query: 2   FIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYDATT 181
           F+ MVSTTVET +PE EI+PGL LL  I QKFV+++DY EPIDDGS+SQIFISESYDATT
Sbjct: 350 FVGMVSTTVETENPEVEIKPGLDLLEPIAQKFVTISDYLEPIDDGSESQIFISESYDATT 409

Query: 182 HFETTCLDVLKIYKHGTGEEFDFSK---SSWNLVKRISK 289
           HFETTC DVL I+K GTGE FDFSK   +SW  V R SK
Sbjct: 410 HFETTCWDVLNIFKRGTGETFDFSKDQGTSW--VTRSSK 446


>AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-PA
            protein.
          Length = 5303

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +2

Query: 68   ALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYDATTHFETTCLDVLKI---YKHGTGE 238
            AL+GAI    ++ T   +P++       +I+E  D  +   TT  D +KI   Y+H  GE
Sbjct: 3082 ALVGAIELCLLTNTPLIDPVEKNRLKNEYIAEDIDCLSTL-TTAYDFMKIAMKYRH-FGE 3139

Query: 239  E 241
            E
Sbjct: 3140 E 3140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,722,042
Number of Sequences: 53049
Number of extensions: 392784
Number of successful extensions: 774
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)