BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbS20914 (433 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF020555-1|AAB68848.1| 173|Caenorhabditis elegans lin-22 protein. 46 2e-05 AC024817-57|AAK68522.1| 173|Caenorhabditis elegans Abnormal cel... 46 2e-05 U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 28 2.5 Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical pr... 28 3.3 Z36753-13|CAA85331.1| 598|Caenorhabditis elegans Hypothetical p... 27 7.7 AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical... 27 7.7 >AF020555-1|AAB68848.1| 173|Caenorhabditis elegans lin-22 protein. Length = 173 Score = 45.6 bits (103), Expect = 2e-05 Identities = 20/43 (46%), Positives = 30/43 (69%) Frame = +1 Query: 127 KPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 255 KP++E+KRRARIN+ L +LK++++ +K EKADIL Sbjct: 26 KPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADIL 68 >AC024817-57|AAK68522.1| 173|Caenorhabditis elegans Abnormal cell lineage protein 22 protein. Length = 173 Score = 45.6 bits (103), Expect = 2e-05 Identities = 20/43 (46%), Positives = 30/43 (69%) Frame = +1 Query: 127 KPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 255 KP++E+KRRARIN+ L +LK++++ +K EKADIL Sbjct: 26 KPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADIL 68 >U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical protein F07E5.5 protein. Length = 384 Score = 28.3 bits (60), Expect = 2.5 Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%) Frame = +1 Query: 73 AEDGPQPVSRTYQYRKVMK-PMLERKRRA 156 AEDG +P+S+T Q RK+ K +ERK RA Sbjct: 50 AEDGDKPMSKT-QKRKLKKAAAIERKERA 77 >Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical protein T07G12.5 protein. Length = 555 Score = 27.9 bits (59), Expect = 3.3 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -1 Query: 151 ASCAQASVSSLCDIDKCARLAADRLPRPNTRSR 53 ASC A + S+ D + CA+++ P P+ +R Sbjct: 284 ASCFAAMIESIGDYNLCAKISKQSRPPPSNTNR 316 >Z36753-13|CAA85331.1| 598|Caenorhabditis elegans Hypothetical protein T09A5.2a protein. Length = 598 Score = 26.6 bits (56), Expect = 7.7 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = +1 Query: 19 LTHDTHTFNMSYEIAYSVAED-GPQPVSRTYQ-YRKVMKPMLERKRRARINRCLDELK 186 +T + F +S + + SV PQP + Y ++++ M E ++ RC +ELK Sbjct: 125 MTSNEDRFALSRDSSCSVPRSVSPQPTGDVIKPYPQMVQSMREEGHWKKLQRCAEELK 182 >AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical protein T02H6.2 protein. Length = 665 Score = 26.6 bits (56), Expect = 7.7 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -1 Query: 139 QASVSSLCDIDKCARLAADRLPR 71 QA S C+ DKC RL AD +PR Sbjct: 343 QAKYVSECE-DKCYRLLADTMPR 364 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,369,378 Number of Sequences: 27780 Number of extensions: 161850 Number of successful extensions: 546 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 521 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 542 length of database: 12,740,198 effective HSP length: 75 effective length of database: 10,656,698 effective search space used: 724655464 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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