Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20914
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    27   0.068
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   1.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   1.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   1.5  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   7.8  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 0.068
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 88  QPVSRTYQYRKVMKPMLERKRRARINRCLDELKELM 195
           +P ++  Q  +     LE+ RRA +  CL++LK L+
Sbjct: 40  RPKTKKSQGSRTTHNELEKNRRAHLRNCLEKLKVLV 75


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 341 WIYSRRQRSFPLSGFNSW 394
           WI S    S PL+G+N W
Sbjct: 161 WILSGAISSPPLAGWNDW 178


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 341 WIYSRRQRSFPLSGFNSW 394
           WI S    S PL+G+N W
Sbjct: 161 WILSGAISSPPLAGWNDW 178


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 341 WIYSRRQRSFPLSGFNSW 394
           WI S    S PL+G+N W
Sbjct: 161 WILSGAISSPPLAGWNDW 178


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 165 VDASAPLALKHRFHHFAILISARDWL 88
           V  S PL   +    F   +SAR WL
Sbjct: 95  VTGSTPLTFVNDTVSFTTTVSARFWL 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,645
Number of Sequences: 438
Number of extensions: 2066
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)