Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20909
         (366 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   0.98 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   3.0  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   3.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    20   6.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   6.9  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    20   9.1  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    20   9.1  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 0.98
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 366 PILLLIFSYSPL 331
           PIL LIFSY P+
Sbjct: 153 PILYLIFSYCPI 164


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 154 VTSVNNFIDQFHF 116
           VTSV +FIDQ+ F
Sbjct: 124 VTSVLSFIDQYGF 136


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 154 VTSVNNFIDQFHF 116
           VTSV +FIDQ+ F
Sbjct: 124 VTSVLSFIDQYGF 136


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 294 TPSVTRNPTHCTSKDYMKKLVA 359
           TP   +N T C  K Y   +VA
Sbjct: 19  TPGFRKNRTTCPEKIYAYGVVA 40


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 294 TPSVTRNPTHCTSKDYMKKLVA 359
           TP   +N T C  K Y   +VA
Sbjct: 19  TPGFRKNRTTCPEKIYAYGVVA 40


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 142 LPK*PVGW*REH 177
           LPK P  W REH
Sbjct: 32  LPKDPRQWTREH 43


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 142 LPK*PVGW*REH 177
           LPK P  W REH
Sbjct: 32  LPKDPRQWTREH 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,286
Number of Sequences: 336
Number of extensions: 1492
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)