Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20909
         (366 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA...    95   3e-20
AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p pro...    93   1e-19

>AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA
           protein.
          Length = 172

 Score = 94.7 bits (225), Expect = 3e-20
 Identities = 51/101 (50%), Positives = 61/101 (60%)
 Frame = +2

Query: 62  MKIYKDIITGDEMFSDTYKMKLVDEVIYRSDR*VGDESTG*YPDRGF*SFXXXXXXXXXX 241
           MKIYKDIITGDEMF+DTYKMKLVD+VIY     +           G  +           
Sbjct: 1   MKIYKDIITGDEMFADTYKMKLVDDVIYEVYGKLITRQGDDIKLEGANASAEEADEGTDI 60

Query: 242 XXXXXVDIVLNHRLVETYAFGDKKSYTLYLKGLYEKISSKI 364
                VD+VLNHRL E +AFGDKKSYTLYLK   +K+ +K+
Sbjct: 61  TSESGVDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKL 101



 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 32/73 (43%), Positives = 42/73 (57%)
 Frame = +3

Query: 147 EVTGRLVTRAQGDIQIEGFNPSAEEADEGTDSAVESELT*S*TTG*SKHTPSVTRNPTHC 326
           EV G+L+TR   DI++EG N SAEEADEGTD   ES +        ++      +     
Sbjct: 29  EVYGKLITRQGDDIKLEGANASAEEADEGTDITSESGVDVVLNHRLTECFAFGDKKSYTL 88

Query: 327 TSKDYMKKLVAKL 365
             KDYMKK++AKL
Sbjct: 89  YLKDYMKKVLAKL 101


>AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p
           protein.
          Length = 172

 Score = 92.7 bits (220), Expect = 1e-19
 Identities = 50/101 (49%), Positives = 60/101 (59%)
 Frame = +2

Query: 62  MKIYKDIITGDEMFSDTYKMKLVDEVIYRSDR*VGDESTG*YPDRGF*SFXXXXXXXXXX 241
           MKIYKDIITGDEMF+DTYKMKLVD+VIY     +           G  +           
Sbjct: 1   MKIYKDIITGDEMFADTYKMKLVDDVIYEVYGKLITRQGDDIKLEGANASAEEADEGTDI 60

Query: 242 XXXXXVDIVLNHRLVETYAFGDKKSYTLYLKGLYEKISSKI 364
                VD+VLNHRL E +AFGDKKSYTLYL    +K+ +K+
Sbjct: 61  TSESGVDVVLNHRLTECFAFGDKKSYTLYLNDYMKKVLAKL 101



 Score = 50.4 bits (115), Expect = 7e-07
 Identities = 31/73 (42%), Positives = 41/73 (56%)
 Frame = +3

Query: 147 EVTGRLVTRAQGDIQIEGFNPSAEEADEGTDSAVESELT*S*TTG*SKHTPSVTRNPTHC 326
           EV G+L+TR   DI++EG N SAEEADEGTD   ES +        ++      +     
Sbjct: 29  EVYGKLITRQGDDIKLEGANASAEEADEGTDITSESGVDVVLNHRLTECFAFGDKKSYTL 88

Query: 327 TSKDYMKKLVAKL 365
              DYMKK++AKL
Sbjct: 89  YLNDYMKKVLAKL 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,154,399
Number of Sequences: 53049
Number of extensions: 267016
Number of successful extensions: 543
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)